WormBase Tree Display for Gene: WBGene00007615
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| WBGene00007615 | SMap | S_parent | Sequence | C15H11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | set-31 | Person_evidence | WBPerson1730 | |||||
| WBPerson268 | |||||||||
| WBPerson632 | |||||||||
| Sequence_name | C15H11.5 | ||||||||
| Molecular_name | C15H11.5 | ||||||||
| C15H11.5.1 | |||||||||
| CE08182 | |||||||||
| C15H11.5.2 | |||||||||
| Other_name | tag-338 | Person_evidence | WBPerson201 | ||||||
| CELE_C15H11.5 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | set-31 | ||||||||
| DB_info | Database | AceView | gene | 5O899 | |||||
| WormQTL | gene | WBGene00007615 | |||||||
| WormFlux | gene | WBGene00007615 | |||||||
| NDB | locus_tag | CELE_C15H11.5 | |||||||
| NCBI | gene | 179939 | |||||||
| RefSeq | protein | NM_074168.7 | |||||||
| TREEFAM | TREEFAM_ID | TF316186 | |||||||
| TrEMBL | UniProtAcc | O17585 | |||||||
| UniProt_GCRP | UniProtAcc | O17585 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 03 May 2007 10:33:07 | WBPerson2970 | Name_change | CGC_name | set-31 | ||||
| Other_name | tag-338 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | set | ||||||||
| Allele (37) | |||||||||
| Strain | WBStrain00036219 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00029985 | ||||||||
| 00029986 | |||||||||
| 00029987 | |||||||||
| 00029988 | |||||||||
| 00029989 | |||||||||
| Ortholog (19) | |||||||||
| Paralog | WBGene00001995 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00020463 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | set-31 encodes a protein with an N-terminal Chromo domain, and a C-terminal SET domain; SET-31 has no obvious non-nematode orthologs; set-31(ok1482) has no obvious mutant phenotype, and SET-31 has no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00030864 | |||||
| WBPaper00030913 | |||||||||
| WBPaper00031076 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 11 Oct 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable catalytic activity. Predicted to be located in chromosome, centromeric region. Expressed in hypodermis. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C15H11.5 | |||||||
| Corresponding_CDS_history | C15H11.5:wp90 | ||||||||
| Corresponding_transcript | C15H11.5.1 | ||||||||
| C15H11.5.2 | |||||||||
| Other_sequence | CBC11357_1 | ||||||||
| Associated_feature | WBsf647530 | ||||||||
| WBsf1002007 | |||||||||
| WBsf232923 | |||||||||
| WBsf232924 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00040620 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00069476 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr14365 | ||||||||
| Expr1010464 | |||||||||
| Expr1033283 | |||||||||
| Expr1144678 | |||||||||
| Expr2015776 | |||||||||
| Expr2034009 | |||||||||
| Drives_construct | WBCnstr00033604 | ||||||||
| Construct_product | WBCnstr00033604 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (122) | |||||||||
| Interaction | WBInteraction000245602 | ||||||||
| WBInteraction000253787 | |||||||||
| WBInteraction000256913 | |||||||||
| WBInteraction000319086 | |||||||||
| WBInteraction000394532 | |||||||||
| WBInteraction000442033 | |||||||||
| WBInteraction000457734 | |||||||||
| WBInteraction000575546 | |||||||||
| Map_info | Map | V | Position | 6.29947 | Error | 0.001753 | |||
| Positive | Positive_clone | C15H11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5277 | |||||||
| 4553 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00017807 | ||||||||
| WBPaper00030864 | |||||||||
| WBPaper00038372 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
