WormBase Tree Display for Gene: WBGene00007675
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| WBGene00007675 | SMap | S_parent | Sequence | C18D4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C18D4.6 | |||||||
| Molecular_name | C18D4.6a | ||||||||
| C18D4.6a.1 | |||||||||
| CE32310 | |||||||||
| C18D4.6c | |||||||||
| CE36469 | |||||||||
| C18D4.6d | |||||||||
| CE47576 | |||||||||
| C18D4.6c.1 | |||||||||
| C18D4.6d.1 | |||||||||
| Other_name | CELE_C18D4.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | C18D4.6 | ||||||||
| DB_info | Database | AceView | gene | 5S16 | |||||
| WormQTL | gene | WBGene00007675 | |||||||
| WormFlux | gene | WBGene00007675 | |||||||
| NDB | locus_tag | CELE_C18D4.6 | |||||||
| NCBI | gene | 180155 | |||||||
| RefSeq | protein | NM_075041.8 | |||||||
| NM_001276987.4 | |||||||||
| NM_001028497.5 | |||||||||
| TrEMBL | UniProtAcc | I2HAG8 | |||||||
| Q6BER7 | |||||||||
| O45263 | |||||||||
| UniProt_GCRP | UniProtAcc | Q6BER7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (84) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrV_pilon.g17483 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog | WBGene00009299 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enriched in several structures, including ABplpppaaa; ABplppppaa; ABprppppaa; neurons; and rectal epithelial cell based on single-cell RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and pie-1 based on microarray and RNA-seq studies. Is affected by six chemicals including hydrogen sulfide; Rifampin; and Psoralens based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C18D4.6a | |||||||
| C18D4.6c | |||||||||
| C18D4.6d | |||||||||
| Corresponding_CDS_history | C18D4.6:wp90 | ||||||||
| C18D4.6b:wp265 | |||||||||
| Corresponding_transcript | C18D4.6a.1 | ||||||||
| C18D4.6c.1 | |||||||||
| C18D4.6d.1 | |||||||||
| Associated_feature | WBsf653515 | ||||||||
| WBsf669819 | |||||||||
| WBsf1002685 | |||||||||
| WBsf1002686 | |||||||||
| WBsf1021303 | |||||||||
| WBsf1021304 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00029074 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00007939 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040931 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011003 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046036 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016441 | ||||||||
| Expr1033314 | |||||||||
| Expr1144979 | |||||||||
| Expr2000976 | |||||||||
| Expr2019195 | |||||||||
| Drives_construct | WBCnstr00033561 | ||||||||
| Construct_product | WBCnstr00033561 | ||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (191) | |||||||||
| Interaction | WBInteraction000257691 | ||||||||
| WBInteraction000290463 | |||||||||
| WBInteraction000409256 | |||||||||
| WBInteraction000421724 | |||||||||
| WBInteraction000541390 | |||||||||
| Map_info | Positive | Positive_clone | C18D4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 12.9179 | |||||||
| Method | Gene |
