WormBase Tree Display for Gene: WBGene00007716

WBGene00007716 SMap: S_parent: Sequence: C25D7
  Identity: Version: 2
    Name: CGC_name: fbxa-82 Person_evidence: WBPerson655
      Sequence_name: C25D7.4
      Molecular_name: C25D7.4a
        C25D7.4a.1
        CE43041
        C25D7.4b
        CE43016
        C25D7.4b.1
      Other_name: CELE_C25D7.4 Accession_evidence: NDB BX284605
      Public_name: fbxa-82
    DB_info: Database: AceView gene 5P530
        WormQTL gene WBGene00007716
        WormFlux gene WBGene00007716
        NDB locus_tag CELE_C25D7.4
        Panther gene CAEEL|WormBase=WBGene00007716|UniProtKB=B5U8N4
          family PTHR23015
        NCBI gene 182883
        RefSeq protein NM_074303.5
            NM_001136409.4
        TREEFAM TREEFAM_ID TF322006
        TrEMBL UniProtAcc B5U8N4
            B5U8N5
        UniProt_GCRP UniProtAcc B5U8N4
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Dec 2005 15:18:56 WBPerson2970 Name_change: CGC_name: fbxa-82
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (35)
    RNASeq_FPKM (74)
    Ortholog (19)
    Paralog (226)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in intestine and muscle cell based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; skn-1; and eat-2 based on microarray and RNA-seq studies. Is affected by seventeen chemicals including multi-walled carbon nanotube; levamisole; and Alovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C25D7.4a
      C25D7.4b
    Corresponding_CDS_history: C25D7.4:wp194
    Corresponding_transcript: C25D7.4a.1
      C25D7.4b.1
    Associated_feature: WBsf653427
      WBsf1002217
      WBsf1002218
      WBsf1020966
      WBsf235020
  Experimental_info: RNAi_result: WBRNAi00011154 Inferred_automatically: RNAi_primary
      WBRNAi00041172 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024455
      Expr1145204
      Expr2011580
      Expr2029820
    Drives_construct: WBCnstr00033534
    Construct_product: WBCnstr00033534
    Microarray_results (15)
    Expression_cluster (156)
    Interaction: WBInteraction000282299
      WBInteraction000342193
      WBInteraction000370550
      WBInteraction000402360
      WBInteraction000504153
  Map_info: Map: V Position: 7.21377 Error: 0.008483
    Positive: Positive_clone: C25D7 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene