WormBase Tree Display for Gene: WBGene00007956
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| WBGene00007956 | SMap | S_parent | Sequence | C35C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | trpp-9 | Person_evidence | WBPerson3188 | |||||
| Sequence_name | C35C5.6 | ||||||||
| Molecular_name | C35C5.6 | ||||||||
| C35C5.6.1 | |||||||||
| CE43393 | |||||||||
| Other_name | CELE_C35C5.6 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | trpp-9 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 08 Aug 2013 16:41:57 | WBPerson2970 | Name_change | CGC_name | trpp-9 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | trpp | ||||||||
| Allele (116) | |||||||||
| Strain | WBStrain00037756 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00085706 | ||||||||
| 00085707 | |||||||||
| Ortholog (35) | |||||||||
| Structured_description | Automated_description | Predicted to be located in trans-Golgi network. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder 13. Is an ortholog of human TRAPPC9 (trafficking protein particle complex subunit 9). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081098 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:30832) | ||||
| Molecular_info | Corresponding_CDS | C35C5.6 | |||||||
| Corresponding_CDS_history | C35C5.6:wp198 | ||||||||
| Corresponding_transcript | C35C5.6.1 | ||||||||
| Other_sequence (31) | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011653 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00041968 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001492 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021516 | ||||||||
| Expr1033454 | |||||||||
| Expr1145982 | |||||||||
| Expr2017515 | |||||||||
| Expr2035654 | |||||||||
| Drives_construct | WBCnstr00033352 | ||||||||
| Construct_product | WBCnstr00033352 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (114) | |||||||||
| Interaction | WBInteraction000313077 | ||||||||
| WBInteraction000355161 | |||||||||
| Map_info | Map | X | Position | 4.65357 | |||||
| Positive | Positive_clone | C35C5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
