WormBase Tree Display for Gene: WBGene00008000
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| WBGene00008000 | SMap | S_parent | Sequence | C38C10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | slc-17.2 | Person_evidence | WBPerson260 | |||||
| Sequence_name | C38C10.2 | ||||||||
| Molecular_name | C38C10.2 | ||||||||
| C38C10.2.1 | |||||||||
| CE08647 | |||||||||
| Other_name | CELE_C38C10.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | slc-17.2 | ||||||||
| DB_info | Database | AceView | gene | 3K478 | |||||
| WormQTL | gene | WBGene00008000 | |||||||
| WormFlux | gene | WBGene00008000 | |||||||
| NDB | locus_tag | CELE_C38C10.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008000|UniProtKB=Q03567 | |||||||
| family | PTHR11662 | ||||||||
| NCBI | gene | 176317 | |||||||
| RefSeq | protein | NM_066664.5 | |||||||
| SwissProt | UniProtAcc | Q03567 | |||||||
| UniProt_GCRP | UniProtAcc | Q03567 | |||||||
| OMIM | gene | 604322 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 27 Jun 2014 15:53:55 | WBPerson2970 | Name_change | CGC_name | slc-17.2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | slc | ||||||||
| Allele (29) | |||||||||
| Strain | WBStrain00001590 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00052308 | ||||||||
| 00052309 | |||||||||
| 00052310 | |||||||||
| 00052311 | |||||||||
| 00052312 | |||||||||
| 00052313 | |||||||||
| 00052314 | |||||||||
| 00115982 | |||||||||
| 00115983 | |||||||||
| Contained_in_operon | CEOP3576 | ||||||||
| Ortholog (51) | |||||||||
| Paralog (58) | |||||||||
| Structured_description | Concise_description | C38C10.2 is orthologous to the human gene SOLUTE CARRIER FAMILY 17 (ANION/SUGAR TRANSPORTER), MEMBER 5 (SLC17A5; OMIM:604322), which when mutated leads to disease. | Curator_confirmed | WBPerson1823 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 06 Aug 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable transmembrane transporter activity. Predicted to be involved in monoatomic anion transport. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in sialuria. Is an ortholog of human SLC17A5 (solute carrier family 17 member 5). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3659 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10933) | ||||
| Molecular_info | Corresponding_CDS | C38C10.2 | |||||||
| Corresponding_transcript | C38C10.2.1 | ||||||||
| Other_sequence (46) | |||||||||
| Associated_feature | WBsf034287 | ||||||||
| WBsf651366 | |||||||||
| WBsf651367 | |||||||||
| WBsf655470 | |||||||||
| WBsf716749 | |||||||||
| WBsf993677 | |||||||||
| WBsf227276 | |||||||||
| WBsf227277 | |||||||||
| WBsf227278 | |||||||||
| WBsf227279 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042132 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00062154 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011738 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006963 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033406 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram534 | ||||||||
| Expr5469 | |||||||||
| Expr1011084 | |||||||||
| Expr1033480 | |||||||||
| Expr1146133 | |||||||||
| Expr2015858 | |||||||||
| Expr2034091 | |||||||||
| Drives_construct | WBCnstr00002430 | ||||||||
| WBCnstr00033318 | |||||||||
| Construct_product | WBCnstr00033318 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (141) | |||||||||
| Interaction (24) | |||||||||
| Map_info | Positive | Positive_clone | C38C10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 0.463318 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00063976 | |||||||||
| Method | Gene |
