WormBase Tree Display for Gene: WBGene00008038
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| WBGene00008038 | SMap | S_parent | Sequence | C40H1 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | C40H1.2 | ||||||||
| Molecular_name | C40H1.2 | |||||||||
| Other_name | CELE_C40H1.2 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | C40H1.2 | |||||||||
| DB_info | Database | AceView | gene | 3K411 | ||||||
| 3K409 | ||||||||||
| WormQTL | gene | WBGene00008038 | ||||||||
| WormFlux | gene | WBGene00008038 | ||||||||
| NDB | locus_tag | CELE_C40H1.2 | ||||||||
| NCBI | gene | 183365 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 20 Jan 2020 12:16:10 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (22) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00031598 | Caenorhabditis briggsae | From_analysis | OMA | ||||||
| WBGene00190046 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00194963 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00055127 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| WBGene00055128 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| Paralog (27) | ||||||||||
| Structured_description | Automated_description | Enriched in RIML; RIMR; and intestine based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-two chemicals including tryptophan; methylmercuric chloride; and Tunicamycin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C40H1.2:wp275 | ||||||||
| Corresponding_pseudogene | C40H1.2 | |||||||||
| Experimental_info | Expr_pattern | Expr1014163 | ||||||||
| Expr1146249 | ||||||||||
| Expr2001554 | ||||||||||
| Expr2019774 | ||||||||||
| Drives_construct | WBCnstr00033285 | |||||||||
| Construct_product | WBCnstr00033285 | |||||||||
| Microarray_results (18) | ||||||||||
| Expression_cluster (143) | ||||||||||
| Interaction (17) | ||||||||||
| Map_info | Positive | Positive_clone | C40H1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | III | 0.40362 | ||||||||
| Method | Gene |
