WormBase Tree Display for Gene: WBGene00008083
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| WBGene00008083 | SMap | S_parent | Sequence | C44C10 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | ||||||||
| Name | CGC_name | cyp-29A1 | ||||||||
| Sequence_name | C44C10.2 | |||||||||
| Molecular_name | C44C10.2 | |||||||||
| Other_name | CELE_C44C10.2 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | cyp-29A1 | |||||||||
| DB_info | Database | AceView | gene | XM324 | ||||||
| WormQTL | gene | WBGene00008083 | ||||||||
| NDB | locus_tag | CELE_C44C10.2 | ||||||||
| NCBI | gene | 13222925 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 21 Sep 2004 09:38:16 | WBPerson1971 | Name_change | CGC_name | cyp-29A1 | |||||
| 3 | 14 Oct 2004 11:55:13 | WBPerson1983 | Event | Split_into | WBGene00043985 | |||||
| 4 | 14 Oct 2004 11:56:06 | WBPerson1983 | Event | Changed_class | CDS | Pseudogene | ||||
| Split_into | WBGene00043985 | |||||||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | cyp | |||||||||
| Allele (52) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Paralog | WBGene00021412 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| Structured_description | Automated_description | Enriched in AVK and sensory neurons based on RNA-seq studies. Is affected by several genes including clk-1; hpl-2; and cyc-1 based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C44C10.2:wp134 | ||||||||
| Corresponding_pseudogene | C44C10.2 | |||||||||
| Other_sequence (13) | ||||||||||
| Experimental_info | Microarray_results | 190199_at | ||||||||
| Aff_C44C10.2 | ||||||||||
| GPL19516_CGZ0008816 | ||||||||||
| GPL21109_C44C10.2 | ||||||||||
| Expression_cluster | WBPaper00033065:cyc-1(RNAi)_upregulated | |||||||||
| WBPaper00033070:Elbe_downregulated | ||||||||||
| WBPaper00045774:clk-1_downregulated | ||||||||||
| WBPaper00054493:hpl-2(tm1489)_upregulated | ||||||||||
| WBPaper00055565:AVK_enriched | ||||||||||
| WBPaper00060661:sensory-neuron_enriched | ||||||||||
| WBPaper00061527:srj-42-srw-113 | ||||||||||
| WBPaper00062325:muscle_depleted_noncoding-RNA | ||||||||||
| WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium | ||||||||||
| WBPaper00065841:30_5 | ||||||||||
| Map_info | Map | X | Position | 6.27871 | ||||||
| Positive | Positive_clone | C44C10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
