WormBase Tree Display for Gene: WBGene00008297
expand all nodes | collapse all nodes | view schema
WBGene00008297 | SMap | S_parent | Sequence | C54D10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | cdr-3 | Person_evidence | WBPerson184 | |||||
Sequence_name | C54D10.2 | ||||||||
Molecular_name | C54D10.2 | ||||||||
C54D10.2.1 | |||||||||
CE35964 | |||||||||
Other_name | tag-183 | Person_evidence | WBPerson201 | ||||||
CELE_C54D10.2 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | cdr-3 | ||||||||
DB_info | Database | AceView | gene | 5M896 | |||||
WormQTL | gene | WBGene00008297 | |||||||
WormFlux | gene | WBGene00008297 | |||||||
NDB | locus_tag | CELE_C54D10.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00008297|UniProtKB=Q18832 | |||||||
family | PTHR12289 | ||||||||
NCBI | gene | 183780 | |||||||
RefSeq | protein | NM_073714.2 | |||||||
TREEFAM | TREEFAM_ID | TF314915 | |||||||
TrEMBL | UniProtAcc | Q18832 | |||||||
UniProt_GCRP | UniProtAcc | Q18832 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 08 Nov 2004 10:09:27 | WBPerson2970 | Name_change | CGC_name | cdr-3 | ||||
3 | 06 Oct 2005 10:50:28 | WBPerson2970 | Event | Acquires_merge | WBGene00007052 | ||||
Name_change | Other_name | tag-183 | |||||||
Acquires_merge | WBGene00007052 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | cdr | ||||||||
Allele (41) | |||||||||
Strain | WBStrain00035913 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00062562 | ||||||||
00062563 | |||||||||
00062564 | |||||||||
Ortholog (52) | |||||||||
Paralog (12) | |||||||||
Structured_description | Concise_description | cdr-3 encodes a predicted transmembrane protein that is a member of the CDR (cadmium responsive) family of proteins; cdr-3 expression is increased upon exposure to cadmium ions. | Paper_evidence | WBPaper00024695 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 17 Apr 2014 00:00:00 | ||||||||
Automated_description | Involved in stress response to cadmium ion. Predicted to be located in cytoplasm. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C54D10.2 | |||||||
Corresponding_CDS_history | C54D10.2:wp113 | ||||||||
Corresponding_transcript | C54D10.2.1 | ||||||||
Other_sequence (16) | |||||||||
Associated_feature | WBsf234678 | ||||||||
Experimental_info | RNAi_result | WBRNAi00043135 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012381 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1010255 | ||||||||
Expr1147107 | |||||||||
Expr2009823 | |||||||||
Drives_construct | WBCnstr00033075 | ||||||||
Construct_product | WBCnstr00033075 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (38) | |||||||||
Interaction (13) | |||||||||
Map_info | Map | V | Position | 4.18809 | Error | 0.008204 | |||
Positive | Positive_clone | C54D10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5540 | |||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00024695 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00044578 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |