WormBase Tree Display for Gene: WBGene00008320
expand all nodes | collapse all nodes | view schema
| WBGene00008320 | SMap | S_parent | Sequence | C54G10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | slc-25A29 | Person_evidence | WBPerson555 | |||||
| Sequence_name | C54G10.4 | ||||||||
| Molecular_name (11) | |||||||||
| Other_name | CELE_C54G10.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | slc-25A29 | ||||||||
| DB_info | Database | AceView | gene | 5P134 | |||||
| WormQTL | gene | WBGene00008320 | |||||||
| WormFlux | gene | WBGene00008320 | |||||||
| NDB | locus_tag | CELE_C54G10.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008320|UniProtKB=Q8I4M0 | |||||||
| family | PTHR45624 | ||||||||
| NCBI | gene | 179969 | |||||||
| RefSeq | protein | NM_001392659.1 | |||||||
| NM_182334.4 | |||||||||
| NM_001307806.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF351739 | |||||||
| TrEMBL | UniProtAcc | M1ZJU4 | |||||||
| Q8I4M0 | |||||||||
| Q18844 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8I4M0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 27 Apr 2016 14:42:59 | WBPerson2970 | Name_change | CGC_name | slc-25A29 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | slc | ||||||||
| Allele (62) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024297 | ||||||||
| 00024298 | |||||||||
| 00024299 | |||||||||
| 00024300 | |||||||||
| 00024301 | |||||||||
| 00024302 | |||||||||
| 00024303 | |||||||||
| Ortholog (36) | |||||||||
| Paralog (35) | |||||||||
| Structured_description | Automated_description | Predicted to enable high-affinity L-arginine transmembrane transporter activity. Predicted to be involved in mitochondrial L-ornithine transmembrane transport. Predicted to be located in mitochondrion. Is an ortholog of human SLC25A29 (solute carrier family 25 member 29). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C54G10.4a | |||||||
| C54G10.4b | |||||||||
| C54G10.4c | |||||||||
| Corresponding_CDS_history | C54G10.4:wp90 | ||||||||
| Corresponding_transcript | C54G10.4a.1 | ||||||||
| C54G10.4a.2 | |||||||||
| C54G10.4b.1 | |||||||||
| C54G10.4b.2 | |||||||||
| C54G10.4c.1 | |||||||||
| Other_sequence (89) | |||||||||
| Associated_feature | WBsf653401 | ||||||||
| WBsf1002095 | |||||||||
| WBsf1002096 | |||||||||
| WBsf234973 | |||||||||
| WBsf234974 | |||||||||
| WBsf234975 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012412 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00117465 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043175 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028533 | ||||||||
| Expr1147153 | |||||||||
| Expr2015869 | |||||||||
| Expr2034102 | |||||||||
| Drives_construct | WBCnstr00033058 | ||||||||
| Construct_product | WBCnstr00033058 | ||||||||
| Microarray_results (35) | |||||||||
| Expression_cluster (120) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Map | V | Position | 6.59832 | |||||
| Positive | Positive_clone | C54G10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059575 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
