WormBase Tree Display for Gene: WBGene00008441

WBGene00008441 SMap: S_parent: Sequence: CHROMOSOME_V
  Identity: Version: 3
    Name: CGC_name: usp-50 Paper_evidence: WBPaper00048833
          Person_evidence: WBPerson170
      Sequence_name: E01B7.1
      Molecular_name: E01B7.1
        E01B7.1.1
        CE42799
        E01B7.1.2
      Other_name: phi-33 Person_evidence: WBPerson2582
        Y59A8B.a Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        Y59A8B.b Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_E01B7.1 Accession_evidence: NDB BX284605
      Public_name: usp-50
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 04 Jan 2016 15:29:00 WBPerson2970 Name_change: CGC_name: usp-50
        3 19 Jun 2008 15:24:43 WBPerson4025 Event: Acquires_merge: WBGene00013342
      Acquires_merge: WBGene00013342
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: usp
    Allele (263)
    RNASeq_FPKM (74)
    GO_annotation: 00010370
      00010371
      00010372
      00116338
      00116339
    Ortholog (38)
    Paralog (18)
    Structured_description: Automated_description: Predicted to enable cysteine-type deubiquitinase activity. Predicted to be involved in proteolysis. Predicted to be located in early endosome. Human ortholog(s) of this gene implicated in ACTH-secreting pituitary adenoma. Is an ortholog of human USP8 (ubiquitin specific peptidase 8). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:7004 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12631)
  Molecular_info: Corresponding_CDS: E01B7.1
    Corresponding_CDS_history: E01B7.1:wp192
    Corresponding_transcript: E01B7.1.1
      E01B7.1.2
    Other_sequence (21)
    Associated_feature (18)
  Experimental_info: RNAi_result: WBRNAi00094699 Inferred_automatically: RNAi_primary
      WBRNAi00030450 Inferred_automatically: RNAi_primary
      WBRNAi00064998 Inferred_automatically: RNAi_primary
      WBRNAi00001621 Inferred_automatically: RNAi_primary
      WBRNAi00043564 Inferred_automatically: RNAi_primary
      WBRNAi00008585 Inferred_automatically: RNAi_primary
      WBRNAi00037623 Inferred_automatically: RNAi_primary
      WBRNAi00064419 Inferred_automatically: RNAi_primary
      WBRNAi00024976 Inferred_automatically: RNAi_primary
      WBRNAi00057749 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1011935
      Expr1033670
      Expr1147557
      Expr2017940
      Expr2036076
    Microarray_results (31)
    Expression_cluster (83)
    Interaction (51)
  Map_info: Map: V Position: 13.3313
    Positive: Positive_clone: E01B7 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00048833
    WBPaper00055090
    WBPaper00061750
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene