WormBase Tree Display for Gene: WBGene00008514
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| WBGene00008514 | SMap | S_parent | Sequence | F02A9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | mrpl-44 | Person_evidence | WBPerson7169 | |||||
| WBPerson117 | |||||||||
| Sequence_name | F02A9.4 | ||||||||
| Molecular_name | F02A9.4 | ||||||||
| F02A9.4.1 | |||||||||
| CE33612 | |||||||||
| Other_name | CELE_F02A9.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | mrpl-44 | ||||||||
| DB_info | Database | AceView | gene | 3K174C | |||||
| 3K174 | |||||||||
| WormQTL | gene | WBGene00008514 | |||||||
| WormFlux | gene | WBGene00008514 | |||||||
| NDB | locus_tag | CELE_F02A9.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008514|UniProtKB=P34384 | |||||||
| family | PTHR11207 | ||||||||
| NCBI | gene | 176285 | |||||||
| RefSeq | protein | NM_066611.6 | |||||||
| SwissProt | UniProtAcc | P34384 | |||||||
| UniProt_GCRP | UniProtAcc | P34384 | |||||||
| OMIM | gene | 611849 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 06 Mar 2018 14:39:45 | WBPerson4025 | Event | Split_into | WBGene00303021 | ||||
| 3 | 07 Jun 2018 14:30:09 | WBPerson1983 | Name_change | CGC_name | mrpl-44 | ||||
| Split_into | WBGene00303021 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mrpl | ||||||||
| Allele (63) | |||||||||
| Strain | WBStrain00051244 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00042057 | ||||||||
| 00042058 | |||||||||
| 00042059 | |||||||||
| 00042060 | |||||||||
| 00042061 | |||||||||
| 00042062 | |||||||||
| 00042063 | |||||||||
| 00042064 | |||||||||
| 00116412 | |||||||||
| 00116413 | |||||||||
| Contained_in_operon | CEOP5623 | ||||||||
| Ortholog (23) | |||||||||
| Structured_description | Concise_description | F02A9.4 is orthologous to the human gene SIMILAR TO METHYLCROTONOYL-COENZYME A CARBOXYLASE 2 (BETA) (MCCC2; OMIM:210210), which when mutated leads to disease. | Curator_confirmed | WBPerson1823 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 06 Aug 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable ribonuclease III activity. Predicted to be involved in mitochondrial translational elongation. Predicted to be located in nucleus. Predicted to be part of microprocessor complex and mitochondrial large ribosomal subunit. Expressed in metacorpus; pm4; pm7; and terminal bulb. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 16. Is an ortholog of human MRPL44 (mitochondrial ribosomal protein L44). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111469 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:16650) | ||||
| Molecular_info | Corresponding_CDS | F02A9.4 | |||||||
| Corresponding_CDS_history | F02A9.4a:wp264 | ||||||||
| F02A9.4b:wp98 | |||||||||
| F02A9.4b:wp264 | |||||||||
| Corresponding_transcript | F02A9.4.1 | ||||||||
| Other_sequence (37) | |||||||||
| Associated_feature | WBsf651337 | ||||||||
| WBsf667233 | |||||||||
| WBsf667234 | |||||||||
| WBsf227239 | |||||||||
| WBsf227240 | |||||||||
| WBsf227241 | |||||||||
| WBsf227242 | |||||||||
| WBsf227243 | |||||||||
| WBsf227244 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr62 | ||||||||
| Expr9566 | |||||||||
| Expr1018612 | |||||||||
| Expr1033705 | |||||||||
| Expr1147764 | |||||||||
| Expr2002208 | |||||||||
| Expr2020429 | |||||||||
| Drives_construct | WBCnstr00032906 | ||||||||
| Construct_product | WBCnstr00014131 | ||||||||
| WBCnstr00032906 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (110) | |||||||||
| Interaction (88) | |||||||||
| Map_info | Map | III | Position | 0.156733 | |||||
| Positive | Positive_clone | F02A9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028564 | ||||||||
| WBPaper00038444 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
