WormBase Tree Display for Gene: WBGene00008557
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| WBGene00008557 | SMap | S_parent | Sequence | F07H5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | idpa-2 | Person_evidence | WBPerson1820 | |||||
| Sequence_name | F07H5.6 | ||||||||
| Molecular_name | F07H5.6 | ||||||||
| F07H5.6.1 | |||||||||
| CE03155 | |||||||||
| Other_name | CELE_F07H5.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | idpa-2 | ||||||||
| DB_info | Database | AceView | gene | 2J82 | |||||
| WormQTL | gene | WBGene00008557 | |||||||
| WormFlux | gene | WBGene00008557 | |||||||
| NDB | locus_tag | CELE_F07H5.6 | |||||||
| NCBI | gene | 184163 | |||||||
| RefSeq | protein | NM_063470.2 | |||||||
| TrEMBL | UniProtAcc | Q19176 | |||||||
| UniProt_GCRP | UniProtAcc | Q19176 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 04 Jan 2022 10:41:14 | WBPerson1983 | Name_change | CGC_name | idpa-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | idpa | ||||||||
| Allele (21) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00026088 | Caenorhabditis briggsae | From_analysis | OMA | |||||
| WBGene00053303 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| WBGene00162811 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| chrII_pilon.g5341 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including GABAergic neurons; GLR; arcade cell; coelomocyte; and head mesodermal cell based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on tiling array; microarray; and RNA-seq studies. Is affected by ten chemicals including multi-walled carbon nanotube; Zidovudine; and Rifampin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F07H5.6 | |||||||
| Corresponding_transcript | F07H5.6.1 | ||||||||
| Associated_feature | WBsf650366 | ||||||||
| WBsf650367 | |||||||||
| WBsf988824 | |||||||||
| WBsf1012748 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00030621 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012858 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043945 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023381 | ||||||||
| Expr1147917 | |||||||||
| Expr2002273 | |||||||||
| Expr2020492 | |||||||||
| Drives_construct | WBCnstr00032874 | ||||||||
| Construct_product | WBCnstr00032874 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (108) | |||||||||
| Interaction (12) | |||||||||
| Map_info | Positive | Positive_clone | F07H5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 0.898861 | |||||||
| Reference | WBPaper00064648 | ||||||||
| Method | Gene |
