WormBase Tree Display for Gene: WBGene00008580

WBGene00008580 SMap: S_parent: Sequence: F08G5
  Identity: Version: 2
    Name: CGC_name: dsb-1 Paper_evidence: WBPaper00043947
          Person_evidence: WBPerson136
      Sequence_name: F08G5.1
      Molecular_name: F08G5.1a
        F08G5.1a.1
        CE41376
        F08G5.1b
        CE05571
        F08G5.1c
        CE49942
        F08G5.1b.1
        F08G5.1c.1
      Other_name: CELE_F08G5.1 Accession_evidence: NDB BX284604
      Public_name: dsb-1
    DB_info: Database: AceView gene 4N175
        WormQTL gene WBGene00008580
        WormFlux gene WBGene00008580
        NDB locus_tag CELE_F08G5.1
        Panther gene CAEEL|WormBase=WBGene00008580|UniProtKB=Q19220
          family PTHR21720
        NCBI gene 178192
        RefSeq protein NM_001268714.3
            NM_001268713.2
            NM_001307026.4
        TREEFAM TREEFAM_ID TF342760
        TrEMBL UniProtAcc D4PH99
            Q19220
            A0A061ADZ9
        UniProt_GCRP UniProtAcc Q19220
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 02 Sep 2013 16:40:12 WBPerson2970 Name_change: CGC_name: dsb-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dsb
    Allele (38)
    Strain: WBStrain00004053
    RNASeq_FPKM (74)
    GO_annotation: 00007577
    Ortholog (29)
    Structured_description: Automated_description: Located in condensed chromosome. Expressed in gonad. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F08G5.1a
      F08G5.1b
      F08G5.1c
    Corresponding_CDS_history: F08G5.1:wp179
    Corresponding_transcript: F08G5.1a.1
      F08G5.1b.1
      F08G5.1c.1
    Other_sequence: CR04708
      CRC00205_1
    Associated_feature: WBsf646474
      WBsf660810
      WBsf998108
      WBsf229289
  Experimental_info: RNAi_result: WBRNAi00061619 Inferred_automatically: RNAi_primary
      WBRNAi00044052 Inferred_automatically: RNAi_primary
      WBRNAi00030669 Inferred_automatically: RNAi_primary
      WBRNAi00012927 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr11228
      Expr11247
      Expr1012184
      Expr1033739
      Expr1148017
      Expr2011098
      Expr2029334
    Drives_construct: WBCnstr00032859
    Construct_product: WBCnstr00032859
    Antibody: WBAntibody00002459
    Microarray_results (18)
    Expression_cluster (128)
    SAGE_tag: SAGE:atatgatgat Strand: Antisense
      SAGE:ttcaatgcaa Strand: Sense
        Unambiguously_mapped
      SAGE:gaagtttcta Strand: Sense
        Unambiguously_mapped
      SAGE:ttacaataaacggtctc Strand: Antisense
      SAGE:ttcaatgcaaaatattt Strand: Sense
        Unambiguously_mapped
      SAGE:ttacaataaa Strand: Antisense
      SAGE:cgatattgatattggtg Strand: Sense
        Unambiguously_mapped
    Interaction (226)
  Map_info: Map: IV Position: 5.91407
    Positive: Positive_clone: F08G5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00044131
    WBPaper00057798
    WBPaper00061782
    WBPaper00062498
    WBPaper00063123
    WBPaper00064207
    WBPaper00064768
    WBPaper00064961
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene