WormBase Tree Display for Gene: WBGene00008664

WBGene00008664 SMap: S_parent: Sequence: F10G8
  Identity: Version: 2
    Name: CGC_name: nubp-1 Person_evidence: WBPerson649
      Sequence_name: F10G8.6
      Molecular_name: F10G8.6
        F10G8.6.1
        CE30749
      Other_name: CELE_F10G8.6 Accession_evidence: NDB BX284601
      Public_name: nubp-1
    DB_info: Database: AceView gene 1K623
        WormQTL gene WBGene00008664
        WormFlux gene WBGene00008664
        NDB locus_tag CELE_F10G8.6
        Panther gene CAEEL|WormBase=WBGene00008664|UniProtKB=Q93459
          family PTHR23264
        NCBI gene 172868
        RefSeq protein NM_060252.8
        SwissProt UniProtAcc Q93459
        TREEFAM TREEFAM_ID TF300755
        UniProt_GCRP UniProtAcc Q93459
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 28 Sep 2012 14:29:00 WBPerson2970 Name_change: CGC_name: nubp-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nubp
    Allele (24)
    RNASeq_FPKM (74)
    GO_annotation (26)
    Contained_in_operon: CEOP1584
    Ortholog (36)
    Structured_description: Concise_description: nubp-1 encodes a nucleotide binding protein that is a member of the NUBP1/NBP35 subclass of MRP/MinD-type P-loop NTPases; NUBP-1 is homologous to vertebrate NUBP1 and Saccharomyces cerevisiae NBP35; in C. elegans, nubp-1 is required for proper cilium formation and also for normally rapid growth and maintenance of the germline; nubp-1 is expressed in ciliated amphid and labial neurons in the head and phasmid neurons in the tail. Paper_evidence: WBPaper00004424
            WBPaper00006395
            WBPaper00028297
            WBPaper00043889
          Curator_confirmed: WBPerson1843
            WBPerson567
          Date_last_updated: 02 Apr 2014 00:00:00
      Automated_description: Predicted to enable iron-sulfur cluster binding activity. Involved in regulation of non-motile cilium assembly. Predicted to be located in cytosol. Expressed in amphid neurons; inner labial neurons; outer labial neurons; and phasmid neurons. Is an ortholog of human NUBP1 (NUBP iron-sulfur cluster assembly factor 1, cytosolic). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F10G8.6
    Corresponding_CDS_history: F10G8.6:wp79
    Corresponding_transcript: F10G8.6.1
    Other_sequence (46)
    Associated_feature: WBsf643654
      WBsf218385
      WBsf218386
  Experimental_info: RNAi_result: WBRNAi00113376 Inferred_automatically: RNAi_primary
      WBRNAi00030797 Inferred_automatically: RNAi_primary
      WBRNAi00003360 Inferred_automatically: RNAi_primary
      WBRNAi00113377 Inferred_automatically: RNAi_primary
      WBRNAi00044328 Inferred_automatically: RNAi_primary
      WBRNAi00116914 Inferred_automatically: RNAi_primary
      WBRNAi00025071 Inferred_automatically: RNAi_primary
      WBRNAi00025072 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr11135
      Expr1021724
      Expr1033770
      Expr1148265
      Expr2014521
      Expr2032760
    Drives_construct: WBCnstr00018178
    Construct_product: WBCnstr00018178
    Microarray_results (23)
    Expression_cluster (85)
    Interaction (67)
  Map_info: Map: I Position: 4.58877
    Positive: Positive_clone: F10G8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00041771
    WBPaper00043889
    WBPaper00049828
    WBPaper00055090
    WBPaper00064339
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene