WormBase Tree Display for Gene: WBGene00008700

WBGene00008700 SMap: S_parent: Sequence: F11D11
  Identity: Version: 2
    Name: CGC_name: clec-254 Person_evidence: WBPerson2531
      Sequence_name: F11D11.5
      Molecular_name: F11D11.5
        F11D11.5.1
        CE43198
      Other_name: CELE_F11D11.5 Accession_evidence: NDB BX284605
      Public_name: clec-254
    DB_info: Database: AceView gene 5T224
        WormQTL gene WBGene00008700
        WormFlux gene WBGene00008700
        NDB locus_tag CELE_F11D11.5
        Panther gene CAEEL|WormBase=WBGene00008700|UniProtKB=O62154
          family PTHR47629
        NCBI gene 184352
        RefSeq protein NM_075260.2
        TREEFAM TREEFAM_ID TF322199
        TrEMBL UniProtAcc O62154
        UniProt_GCRP UniProtAcc O62154
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 09 Oct 2007 15:40:27 WBPerson2970 Name_change: CGC_name: clec-254
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele (41)
    RNASeq_FPKM (74)
    Ortholog: WBGene00153429 Caenorhabditis brenneri From_analysis: TreeFam
      CSP21.g6726 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      chrV_pilon.g17759 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (117)
    Structured_description: Automated_description: Is affected by several genes including aak-2; set-2; and drh-3 based on RNA-seq studies. Is affected by dafa#1 based on microarray studies. Is predicted to encode a protein with the following domains: C-type lectin fold; PAN-3 domain; C-type lectin-like/link domain superfamily; PAN-like domain; and C-type lectin-like. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F11D11.5
    Corresponding_CDS_history: F11D11.5:wp196
    Corresponding_transcript: F11D11.5.1
  Experimental_info: RNAi_result: WBRNAi00044380 Inferred_automatically: RNAi_primary
      WBRNAi00013127 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1016421
      Expr1148326
      Expr2028391
    Drives_construct: WBCnstr00032759
    Construct_product: WBCnstr00032759
    Microarray_results (13)
    Expression_cluster (30)
    Interaction (265)
  Map_info: Map: V Position: 17.6638 Error: 0.010255
    Positive: Positive_clone: F11D11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene