WormBase Tree Display for Gene: WBGene00008876
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| WBGene00008876 | SMap | S_parent | Sequence | F16A11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F16A11.1 | |||||||
| Molecular_name | F16A11.1a | ||||||||
| F16A11.1a.1 | |||||||||
| CE17679 | |||||||||
| F16A11.1b | |||||||||
| CE42783 | |||||||||
| F16A11.1b.1 | |||||||||
| Other_name | CELE_F16A11.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | F16A11.1 | ||||||||
| DB_info | Database | AceView | gene | 1J970 | |||||
| WormQTL | gene | WBGene00008876 | |||||||
| WormFlux | gene | WBGene00008876 | |||||||
| NDB | locus_tag | CELE_F16A11.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008876|UniProtKB=P90839 | |||||||
| family | PTHR13363 | ||||||||
| NCBI | gene | 172764 | |||||||
| RefSeq | protein | NM_060098.6 | |||||||
| NM_001136293.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF313546 | |||||||
| TrEMBL | UniProtAcc | P90839 | |||||||
| B3WFX6 | |||||||||
| UniProt_GCRP | UniProtAcc | P90839 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (99) | |||||||||
| Strain | WBStrain00003126 | ||||||||
| WBStrain00047564 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00006075 | ||||||||
| 00006076 | |||||||||
| 00006077 | |||||||||
| 00006078 | |||||||||
| 00116695 | |||||||||
| Contained_in_operon | CEOP1932 | ||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to enable ubiquitin-protein transferase activity. Predicted to be involved in proteolysis involved in protein catabolic process. Predicted to be located in cytoplasm. Is an ortholog of human RSPRY1 (ring finger and SPRY domain containing 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F16A11.1a | |||||||
| F16A11.1b | |||||||||
| Corresponding_transcript | F16A11.1a.1 | ||||||||
| F16A11.1b.1 | |||||||||
| Other_sequence (31) | |||||||||
| Associated_feature | WBsf649463 | ||||||||
| WBsf664733 | |||||||||
| WBsf664734 | |||||||||
| WBsf664735 | |||||||||
| WBsf664736 | |||||||||
| WBsf664737 | |||||||||
| WBsf664738 | |||||||||
| WBsf716945 | |||||||||
| WBsf984674 | |||||||||
| WBsf1010365 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00076308 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00031020 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116921 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003393 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094750 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000677 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044771 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1918 | ||||||||
| Expr5772 | |||||||||
| Expr1016310 | |||||||||
| Expr1033869 | |||||||||
| Expr1148736 | |||||||||
| Expr2002640 | |||||||||
| Expr2020857 | |||||||||
| Drives_construct | WBCnstr00003609 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (132) | |||||||||
| Interaction (21) | |||||||||
| Map_info | Positive | Positive_clone | F16A11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 3.75958 | |||||||
| Reference | WBPaper00027315 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Method | Gene |
