WormBase Tree Display for Gene: WBGene00008884
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| WBGene00008884 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-281 | Person_evidence | WBPerson600 | |||||
| WBPerson655 | |||||||||
| Sequence_name | F16B12.8 | ||||||||
| Molecular_name | F16B12.8 | ||||||||
| F16B12.8.1 | |||||||||
| CE35489 | |||||||||
| Other_name | CELE_F16B12.8 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | nhr-281 | ||||||||
| DB_info | Database | AceView | gene | XO728 | |||||
| WormQTL | gene | WBGene00008884 | |||||||
| WormFlux | gene | WBGene00008884 | |||||||
| NDB | locus_tag | CELE_F16B12.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008884|UniProtKB=G5EE08 | |||||||
| family | PTHR45886 | ||||||||
| NCBI | gene | 184567 | |||||||
| RefSeq | protein | NM_077950.4 | |||||||
| TREEFAM | TREEFAM_ID | TF315970 | |||||||
| TrEMBL | UniProtAcc | G5EE08 | |||||||
| UniProt_GCRP | UniProtAcc | G5EE08 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 21 Dec 2005 10:23:51 | WBPerson2970 | Name_change | CGC_name | nhr-281 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (71) | |||||||||
| Strain | WBStrain00037391 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00015222 | ||||||||
| 00015223 | |||||||||
| 00015224 | |||||||||
| 00015225 | |||||||||
| 00116701 | |||||||||
| 00116702 | |||||||||
| 00116703 | |||||||||
| 00116704 | |||||||||
| Ortholog (35) | |||||||||
| Paralog (218) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F16B12.8 | |||||||
| Corresponding_CDS_history | F16B12.8:wp109 | ||||||||
| Corresponding_transcript | F16B12.8.1 | ||||||||
| Associated_feature | WBsf654556 | ||||||||
| WBsf671236 | |||||||||
| Transcription_factor | WBTranscriptionFactor000816 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00044780 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00107232 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031024 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013404 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022379 | ||||||||
| Expr1148745 | |||||||||
| Expr2014170 | |||||||||
| Expr2032414 | |||||||||
| Drives_construct | WBCnstr00032616 | ||||||||
| Construct_product | WBCnstr00032616 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (50) | |||||||||
| Interaction (26) | |||||||||
| Map_info | Map | X | Position | 16.4865 | Error | 0.014953 | |||
| Positive | Positive_clone | F16B12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
