WormBase Tree Display for Gene: WBGene00008980
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WBGene00008980 | SMap | S_parent | Sequence | F20D1 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | emre-1 | Person_evidence | WBPerson105 | |||
Sequence_name | F20D1.10 | ||||||
Molecular_name | F20D1.10 | ||||||
F20D1.10.1 | |||||||
CE23677 | |||||||
Other_name | tag-299 | ||||||
CELE_F20D1.10 | Accession_evidence | NDB | BX284606 | ||||
Public_name | emre-1 | ||||||
DB_info | Database | AceView | gene | XP599 | |||
WormQTL | gene | WBGene00008980 | |||||
WormFlux | gene | WBGene00008980 | |||||
NDB | locus_tag | CELE_F20D1.10 | |||||
Panther | gene | CAEEL|WormBase=WBGene00008980|UniProtKB=Q9U3I4 | |||||
family | PTHR33904 | ||||||
NCBI | gene | 181594 | |||||
RefSeq | protein | NM_078086.7 | |||||
SwissProt | UniProtAcc | Q9U3I4 | |||||
TREEFAM | TREEFAM_ID | TF314649 | |||||
UniProt_GCRP | UniProtAcc | Q9U3I4 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (3) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | emre | ||||||
Allele (15) | |||||||
Strain | WBStrain00002501 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (15) | |||||||
Contained_in_operon | CEOPX130 | ||||||
Ortholog (20) | |||||||
Structured_description | Automated_description | Involved in mitochondrial calcium ion homeostasis and mitochondrial calcium ion transmembrane transport. Located in mitochondrion. Is an ortholog of human SMDT1 (single-pass membrane protein with aspartate rich tail 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F20D1.10 | |||||
Corresponding_transcript | F20D1.10.1 | ||||||
Other_sequence (16) | |||||||
Associated_feature | WBsf034316 | ||||||
WBsf1008058 | |||||||
WBsf236743 | |||||||
WBsf236744 | |||||||
Experimental_info | RNAi_result | WBRNAi00031165 | Inferred_automatically | RNAi_primary | |||
WBRNAi00045093 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr5803 | ||||||
Expr9519 | |||||||
Expr1012730 | |||||||
Expr1033910 | |||||||
Expr1149043 | |||||||
Expr2011313 | |||||||
Expr2029549 | |||||||
Drives_construct | WBCnstr00003087 | ||||||
WBCnstr00037861 | |||||||
Construct_product | WBCnstr00014084 | ||||||
WBCnstr00037861 | |||||||
Microarray_results (23) | |||||||
Expression_cluster (146) | |||||||
Map_info | Map | X | Position | 21.6164 | Error | 0.007322 | |
Positive | Positive_clone | F20D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5199 | |||||
5052 | |||||||
5568 | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00038444 | ||||||
WBPaper00038491 | |||||||
WBPaper00049784 | |||||||
WBPaper00055090 | |||||||
WBPaper00063976 | |||||||
WBPaper00064898 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |