WormBase Tree Display for Gene: WBGene00008995
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| WBGene00008995 | SMap | S_parent | Sequence | F21A3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | prde-1 | Paper_evidence | WBPaper00045062 | |||||
| Person_evidence | WBPerson1719 | ||||||||
| Sequence_name | F21A3.5 | ||||||||
| Molecular_name | F21A3.5 | ||||||||
| F21A3.5.1 | |||||||||
| CE44026 | |||||||||
| F21A3.5.2 | |||||||||
| Other_name | CELE_F21A3.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | prde-1 | ||||||||
| DB_info | Database | AceView | gene | 5Q23 | |||||
| WormQTL | gene | WBGene00008995 | |||||||
| WormFlux | gene | WBGene00008995 | |||||||
| NDB | locus_tag | CELE_F21A3.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008995|UniProtKB=O17828 | |||||||
| family | PTHR11909 | ||||||||
| NCBI | gene | 184750 | |||||||
| RefSeq | protein | NM_074465.4 | |||||||
| SwissProt | UniProtAcc | O17828 | |||||||
| UniProt_GCRP | UniProtAcc | O17828 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 May 2014 11:44:19 | WBPerson2970 | Name_change | CGC_name | prde-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | prde | ||||||||
| Allele (161) | |||||||||
| Strain | WBStrain00034646 | ||||||||
| WBStrain00034647 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00030786 | ||||||||
| 00030787 | |||||||||
| 00030788 | |||||||||
| 00030789 | |||||||||
| 00030790 | |||||||||
| 00030791 | |||||||||
| 00030792 | |||||||||
| 00030793 | |||||||||
| 00030794 | |||||||||
| 00030795 | |||||||||
| Ortholog (21) | |||||||||
| Paralog (93) | |||||||||
| Structured_description | Automated_description | Predicted to enable protein serine/threonine kinase activity. Involved in positive regulation of piRNA transcription. Located in autosome. Expressed in PLML; PLMR; and germ cell. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F21A3.5 | |||||||
| Corresponding_CDS_history | F21A3.5:wp182 | ||||||||
| F21A3.5:wp204 | |||||||||
| Corresponding_transcript | F21A3.5.1 | ||||||||
| F21A3.5.2 | |||||||||
| Other_sequence (20) | |||||||||
| Associated_feature | WBsf662125 | ||||||||
| WBsf662126 | |||||||||
| WBsf662127 | |||||||||
| WBsf662128 | |||||||||
| WBsf662129 | |||||||||
| WBsf1002301 | |||||||||
| WBsf1002302 | |||||||||
| WBsf1021028 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045164 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr11701 | ||||||||
| Expr11702 | |||||||||
| Expr13527 | |||||||||
| Expr13528 | |||||||||
| Expr1025315 | |||||||||
| Expr1033917 | |||||||||
| Expr1149102 | |||||||||
| Expr2015086 | |||||||||
| Expr2033323 | |||||||||
| Drives_construct | WBCnstr00019318 | ||||||||
| Construct_product | WBCnstr00019175 | ||||||||
| WBCnstr00019318 | |||||||||
| Antibody | WBAntibody00002519 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (89) | |||||||||
| Interaction (29) | |||||||||
| Map_info | Map | V | Position | 8.33797 | |||||
| Positive | Positive_clone | F21A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
