WormBase Tree Display for Gene: WBGene00009050
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| WBGene00009050 | SMap | S_parent | Sequence | F22D6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mstr-1 | Author_evidence | WBPerson137 | |||||
| WBPerson33961 | |||||||||
| Sequence_name | F22D6.2 | ||||||||
| Molecular_name | F22D6.2 | ||||||||
| F22D6.2.1 | |||||||||
| CE05683 | |||||||||
| F22D6.2.2 | |||||||||
| Other_name | CELE_F22D6.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | mstr-1 | ||||||||
| DB_info | Database | AceView | gene | 1H656 | |||||
| WormQTL | gene | WBGene00009050 | |||||||
| WormFlux | gene | WBGene00009050 | |||||||
| NDB | locus_tag | CELE_F22D6.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009050|UniProtKB=Q19723 | |||||||
| family | PTHR10634 | ||||||||
| NCBI | gene | 172441 | |||||||
| RefSeq | protein | NM_001383296.2 | |||||||
| TREEFAM | TREEFAM_ID | TF313612 | |||||||
| TrEMBL | UniProtAcc | Q19723 | |||||||
| UniProt_GCRP | UniProtAcc | Q19723 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 10 Jul 2023 23:47:10 | WBPerson51134 | Name_change | CGC_name | mstr-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mstr | ||||||||
| Allele (29) | |||||||||
| Strain | WBStrain00001599 | ||||||||
| WBStrain00002659 | |||||||||
| WBStrain00036439 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00065629 | ||||||||
| 00065630 | |||||||||
| 00116835 | |||||||||
| 00116836 | |||||||||
| Contained_in_operon | CEOP1364 | ||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00010155 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA binding activity and zinc ion binding activity. Located in nucleus. Is an ortholog of human ZFAND5 (zinc finger AN1-type containing 5) and ZFAND6 (zinc finger AN1-type containing 6). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F22D6.2 | |||||||
| Corresponding_transcript | F22D6.2.1 | ||||||||
| F22D6.2.2 | |||||||||
| Other_sequence (82) | |||||||||
| Associated_feature (20) | |||||||||
| Transcription_factor | WBTranscriptionFactor000715 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00001211 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003426 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116923 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031270 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045315 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram538 | ||||||||
| Expr5823 | |||||||||
| Expr5824 | |||||||||
| Expr9500 | |||||||||
| Expr1027300 | |||||||||
| Expr1033946 | |||||||||
| Expr1149239 | |||||||||
| Expr1200337 | |||||||||
| Expr2002860 | |||||||||
| Expr2021077 | |||||||||
| Drives_construct | WBCnstr00002438 | ||||||||
| WBCnstr00003202 | |||||||||
| WBCnstr00032498 | |||||||||
| Construct_product | WBCnstr00014065 | ||||||||
| WBCnstr00016796 | |||||||||
| WBCnstr00017359 | |||||||||
| WBCnstr00032498 | |||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (154) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Map | I | Position | 1.70911 | |||||
| Positive | Positive_clone | F22D6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024494 | ||||||||
| WBPaper00027309 | |||||||||
| WBPaper00030887 | |||||||||
| WBPaper00038444 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00057620 | |||||||||
| WBPaper00062808 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
