WormBase Tree Display for Gene: WBGene00009086
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| WBGene00009086 | SMap | S_parent | Sequence | F23D12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | Sequence_name | F23D12.2 | |||||||
| Molecular_name | F23D12.2 | ||||||||
| F23D12.2.1 | |||||||||
| CE53215 | |||||||||
| Other_name | CELE_F23D12.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F23D12.2 | ||||||||
| DB_info | Database | AceView | gene | XP36 | |||||
| WormQTL | gene | WBGene00009086 | |||||||
| WormFlux | gene | WBGene00009086 | |||||||
| NDB | locus_tag | CELE_F23D12.2 | |||||||
| NCBI | gene | 181542 | |||||||
| RefSeq | protein | NM_001373574.1 | |||||||
| TrEMBL | UniProtAcc | Q19761 | |||||||
| UniProt_GCRP | UniProtAcc | Q19761 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 26 Feb 2007 14:58:12 | WBPerson1983 | Event | Split_into | WBGene00045291 | ||||
| 3 | 26 Feb 2007 15:02:00 | WBPerson1983 | Event | Split_into | WBGene00045292 | ||||
| Split_into | WBGene00045292 | ||||||||
| WBGene00045291 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (108) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOPX163 | ||||||||
| Ortholog | WBGene00027137 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| WBGene00155379 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00072754 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| chrX_pilon.g20575 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in germ line and head mesodermal cell based on RNA-seq studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by seventeen chemicals including D-glucose; Alovudine; and stavudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F23D12.2 | |||||||
| Corresponding_CDS_history | F23D12.2:wp172 | ||||||||
| F23D12.2:wp196 | |||||||||
| F23D12.2:wp215 | |||||||||
| F23D12.2:wp271 | |||||||||
| Corresponding_transcript | F23D12.2.1 | ||||||||
| Associated_feature | WBsf671260 | ||||||||
| WBsf1007903 | |||||||||
| WBsf1024399 | |||||||||
| WBsf238235 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00013812 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00045409 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026491 | ||||||||
| Expr1033958 | |||||||||
| Expr1149333 | |||||||||
| Expr2002914 | |||||||||
| Expr2021131 | |||||||||
| Drives_construct | WBCnstr00032476 | ||||||||
| Construct_product | WBCnstr00032476 | ||||||||
| Microarray_results (11) | |||||||||
| Expression_cluster (142) | |||||||||
| Map_info | Positive | Positive_clone | F23D12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 16.7027 | |||||||
| Reference | WBPaper00012854 | ||||||||
| Method | Gene |
