WormBase Tree Display for Gene: WBGene00009117
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| WBGene00009117 | SMap | S_parent | Sequence | F25H2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F25H2.3 | |||||||
| Molecular_name | F25H2.3 | ||||||||
| F25H2.3.1 | |||||||||
| CE46801 | |||||||||
| Other_name | CELE_F25H2.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | F25H2.3 | ||||||||
| DB_info | Database | AceView | gene | 1L123 | |||||
| WormQTL | gene | WBGene00009117 | |||||||
| WormFlux | gene | WBGene00009117 | |||||||
| NDB | locus_tag | CELE_F25H2.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009117|UniProtKB=Q93567 | |||||||
| family | PTHR16058 | ||||||||
| NCBI | gene | 184936 | |||||||
| RefSeq | protein | NM_060358.4 | |||||||
| TrEMBL | UniProtAcc | Q93567 | |||||||
| UniProt_GCRP | UniProtAcc | Q93567 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (32) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00086700 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | |||||
| CSP40.g15160 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
| Cni-F25H2.3 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| Csp5_scaffold_02728.g27712 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
| chrI_pilon.g2071 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in neurons based on RNA-seq studies. Is affected by several genes including daf-12; eat-2; and mex-3 based on tiling array; microarray; and RNA-seq studies. Is affected by Rifampin and Colistin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Ankyrin repeat-containing domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F25H2.3 | |||||||
| Corresponding_CDS_history | F25H2.3:wp187 | ||||||||
| F25H2.3:wp228 | |||||||||
| Corresponding_transcript | F25H2.3.1 | ||||||||
| Associated_feature | WBsf985033 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00003458 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00045539 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011589 | ||||||||
| Expr1149453 | |||||||||
| Expr2002972 | |||||||||
| Expr2021188 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (41) | |||||||||
| Interaction (89) | |||||||||
| Map_info | Positive | Positive_clone | F25H2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 5.05478 | |||||||
| Method | Gene |
