WormBase Tree Display for Gene: WBGene00009214

WBGene00009214 SMap: S_parent: Sequence: F28D1
  Identity: Version: 3
    Name: CGC_name: thn-3
      Sequence_name: F28D1.4
      Molecular_name: F28D1.4
      Other_name: CELE_F28D1.4 Accession_evidence: NDB BX284604
      Public_name: thn-3
    DB_info: Database: AceView gene 4N145
        WormQTL gene WBGene00009214
        WormFlux gene WBGene00009214
        NDB locus_tag CELE_F28D1.4
        NCBI gene 185061
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 25 Aug 2004 11:47:53 WBPerson1971 Name_change: CGC_name: thn-3
        3 12 Nov 2018 17:07:56 WBPerson4025 Event: Changed_class: CDS Pseudogene
    Status: Live
  Gene_info: Biotype: SO:0000336
    Gene_class: thn
    Allele (30)
    RNASeq_FPKM (74)
    Ortholog: WBGene00135349 Caenorhabditis japonica From_analysis: OMA
            TreeFam
      WBGene00120808 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00111800 Pristionchus pacificus From_analysis: Inparanoid_8
    Paralog: WBGene00009213 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
      WBGene00009215 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
      WBGene00021992 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
      WBGene00021999 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
      WBGene00009858 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
    Structured_description: Automated_description: Enriched in GABAergic neurons and dopaminergic neurons based on tiling array and RNA-seq studies. Is affected by several genes including sir-2.1; clk-1; and pgl-1 based on microarray and RNA-seq studies. Is affected by five chemicals including fluoranthene; Quercetin; and copper sulfate based on microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS_history: F28D1.4:wp243
      F28D1.4:wp268
      F28D1.4a:wp268
    Corresponding_transcript_history: F28D1.4b:wp268
    Corresponding_pseudogene: F28D1.4
  Experimental_info: Expr_pattern: Expr1015738
      Expr1149736
      Expr2017387
      Expr2035524
    Drives_construct: WBCnstr00032365
    Construct_product: WBCnstr00032365
    Microarray_results (15)
    Expression_cluster (50)
    Interaction (116)
  Map_info: Map: IV Position: 5.8886 Error: 0.001623
    Positive: Positive_clone: F28D1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene