WormBase Tree Display for Gene: WBGene00009359
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WBGene00009359 | SMap | S_parent | Sequence | F33E2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | clec-102 | Person_evidence | WBPerson2531 | |||||
Sequence_name | F33E2.3 | ||||||||
Molecular_name | F33E2.3 | ||||||||
F33E2.3.1 | |||||||||
CE42807 | |||||||||
Other_name | CELE_F33E2.3 | Accession_evidence | NDB | BX284601 | |||||
Public_name | clec-102 | ||||||||
DB_info | Database | AceView | gene | 1N170 | |||||
WormQTL | gene | WBGene00009359 | |||||||
WormFlux | gene | WBGene00009359 | |||||||
NDB | locus_tag | CELE_F33E2.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00009359|UniProtKB=O01701 | |||||||
family | PTHR23124 | ||||||||
NCBI | gene | 185233 | |||||||
RefSeq | protein | NM_060787.2 | |||||||
TREEFAM | TREEFAM_ID | TF322199 | |||||||
TrEMBL | UniProtAcc | O01701 | |||||||
UniProt_GCRP | UniProtAcc | O01701 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-102 | ||||
3 | 10 Jun 2008 13:49:36 | WBPerson1983 | Event | Split_into | WBGene00077769 | ||||
Split_into | WBGene00077769 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | clec | ||||||||
Allele (22) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (26) | |||||||||
Paralog (117) | |||||||||
Structured_description | Automated_description | Enriched in MSpaaaaa and body wall muscle cell based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-12; pgl-1; and glh-1 based on microarray; tiling array; and RNA-seq studies. Is affected by six chemicals including Tunicamycin; Psoralens; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin fold; PAN-3 domain; C-type lectin-like/link domain superfamily; PAN-like domain; and C-type lectin-like. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F33E2.3 | |||||||
Corresponding_CDS_history | F33E2.3:wp192 | ||||||||
Corresponding_transcript | F33E2.3.1 | ||||||||
Experimental_info | RNAi_result | WBRNAi00046216 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00003577 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1014972 | ||||||||
Expr1150103 | |||||||||
Expr2010049 | |||||||||
Expr2028290 | |||||||||
Drives_construct | WBCnstr00032256 | ||||||||
Construct_product | WBCnstr00032256 | ||||||||
Microarray_results | SMD_F33E2.3 | ||||||||
GPL14144_F33E2.3_656-715_0.967_1_A | |||||||||
GPL19516_CGZ0019482 | |||||||||
GPL21109_F33E2.3 | |||||||||
GPL8673_F33E2_3P00488 | |||||||||
Expression_cluster (37) | |||||||||
Interaction (33) | |||||||||
Map_info | Map | I | Position | 13.6345 | Error | 0.011476 | |||
Positive | Positive_clone | F33E2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |