WormBase Tree Display for Gene: WBGene00009494
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WBGene00009494 | SMap | S_parent | Sequence | F36H1 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | hrg | ||||||
Allele (16) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00082550 | ||||||
00082551 | |||||||
00082552 | |||||||
00082553 | |||||||
00082554 | |||||||
00082555 | |||||||
00082556 | |||||||
00082557 | |||||||
00117145 | |||||||
00117146 | |||||||
Ortholog (21) | |||||||
Paralog | WBGene00009493 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00019830 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00009495 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Concise_description | hrg-5 encodes a nematode-specific transmembrane protein that is paralogous to the heme transporters, HRG-1 and HRG-4; hrg-5 expression is constitutive, and does not appear to be regulated by varying heme concentrations. | Paper_evidence | WBPaper00031703 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 21 Aug 2009 00:00:00 | ||||||
Automated_description | Predicted to enable heme binding activity and heme transmembrane transporter activity. Predicted to be involved in heme transport. Predicted to be located in lysosomal membrane and plasma membrane. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F36H1.9 | |||||
Corresponding_transcript | F36H1.9.1 | ||||||
F36H1.9.2 | |||||||
Associated_feature | WBsf668287 | ||||||
Experimental_info | Expr_pattern | Expr1028823 | |||||
Expr1150405 | |||||||
Expr2012597 | |||||||
Expr2030833 | |||||||
Drives_construct | WBCnstr00032142 | ||||||
Construct_product | WBCnstr00032142 | ||||||
Microarray_results | A_12_P117081 | ||||||
GPL13394_WBGene00009494 | |||||||
GPL13914_F36H1.9 | |||||||
GPL14144_F36H1.9_10-69_0.936_1_A | |||||||
GPL19516_CGZ0020067 | |||||||
GPL21109_F36H1.9 | |||||||
GPL8304_CE_WBGene00009494_A | |||||||
GPL8673_F36H1_9P00015 | |||||||
GPL8673_F36H1_9P00133 | |||||||
GPL8673_F36H1_9P00217 | |||||||
Expression_cluster (34) | |||||||
Interaction | WBInteraction000517502 | ||||||
WBInteraction000517505 | |||||||
WBInteraction000517506 | |||||||
WBInteraction000517512 | |||||||
WBInteraction000517513 | |||||||
WBInteraction000517514 | |||||||
WBInteraction000504814 | |||||||
Map_info | Map | IV | Position | 4.78983 | Error | 0.001074 | |
Positive | Positive_clone | F36H1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00031703 | ||||||
WBPaper00043841 | |||||||
WBPaper00061065 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |