WormBase Tree Display for Gene: WBGene00009526
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| WBGene00009526 | SMap | S_parent | Sequence | F38A1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-169 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | F38A1.14 | ||||||||
| Molecular_name | F38A1.14 | ||||||||
| F38A1.14.1 | |||||||||
| CE43684 | |||||||||
| Other_name | CELE_F38A1.14 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | clec-169 | ||||||||
| DB_info | Database | AceView | gene | 4C13 | |||||
| WormQTL | gene | WBGene00009526 | |||||||
| WormFlux | gene | WBGene00009526 | |||||||
| NDB | locus_tag | CELE_F38A1.14 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009526|UniProtKB=A4F316 | |||||||
| family | PTHR23062 | ||||||||
| NCBI | gene | 3565430 | |||||||
| RefSeq | protein | NM_001028016.4 | |||||||
| TREEFAM | TREEFAM_ID | TF317818 | |||||||
| TrEMBL | UniProtAcc | A4F316 | |||||||
| UniProt_GCRP | UniProtAcc | A4F316 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-169 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (136) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (53) | |||||||||
| Paralog (45) | |||||||||
| Structured_description | Automated_description | Enriched in Z1; Z4; and intestine based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on tiling array; microarray; and RNA-seq studies. Is affected by twenty-five chemicals including tryptophan; 1-methylnicotinamide; and nicotinic acid based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F38A1.14 | |||||||
| Corresponding_CDS_history | F38A1.14:wp202 | ||||||||
| Corresponding_transcript | F38A1.14.1 | ||||||||
| Associated_feature | WBsf995389 | ||||||||
| WBsf1016687 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00046658 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1021019 | ||||||||
| Expr1150531 | |||||||||
| Expr2010092 | |||||||||
| Expr2028334 | |||||||||
| Microarray_results | A_12_P106512 | ||||||||
| GPL14144_F38A1.14_785-844_0.908_10_A | |||||||||
| GPL19516_CGZ0020325 | |||||||||
| GPL21109_F38A1.14 | |||||||||
| GPL8304_CE_WBGene00009526_A | |||||||||
| GPL8304_CE_WBGene00009526_B | |||||||||
| GPL8673_F38A1_14P00181 | |||||||||
| GPL8673_F38A1_14P00607 | |||||||||
| GPL8673_F38A1_14P01284 | |||||||||
| Expression_cluster (182) | |||||||||
| Map_info | Map | IV | Position | -20.584 | Error | 0.044473 | |||
| Positive | Positive_clone | F38A1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00058665 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
