WormBase Tree Display for Gene: WBGene00009539
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WBGene00009539 | SMap | S_parent | Sequence | F38C2 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (29) | ||||||
Strain | WBStrain00037597 | |||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00034583 | |||||
00034584 | ||||||
00034585 | ||||||
00117188 | ||||||
00117189 | ||||||
Ortholog (53) | ||||||
Paralog (20) | ||||||
Structured_description | Concise_description | F38C2.7 encodes a CCCH tandem zinc finger (TZF) protein; based upon its sequence similarity to other TZF proteins, such as MEX-5 and POS-1, the product of F38C2.7 is predicted to function as an RNA-binding protein. | Paper_evidence | WBPaper00029038 | ||
Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 18 Sep 2007 00:00:00 | |||||
Automated_description | Predicted to enable mRNA 3'-UTR binding activity. Predicted to be located in cytosol. Expressed widely. Human ortholog(s) of this gene implicated in breast cancer. Is an ortholog of human ZFP36 (ZFP36 ring finger protein); ZFP36L1 (ZFP36 ring finger protein like 1); and ZFP36L2 (ZFP36 ring finger protein like 2). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:1612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12862) | |
EFO:MONDO:0014769 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1108) | |||
Molecular_info | Corresponding_CDS | F38C2.7 | ||||
Corresponding_transcript | F38C2.7.1 | |||||
Associated_feature | WBsf978618 | |||||
Transcription_factor | WBTranscriptionFactor001007 | |||||
Experimental_info | RNAi_result | WBRNAi00031959 | Inferred_automatically | RNAi_primary | ||
WBRNAi00014558 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00046704 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr7548 | |||||
Expr10315 | ||||||
Expr10316 | ||||||
Expr1034168 | ||||||
Expr1150585 | ||||||
Expr2003477 | ||||||
Expr2021692 | ||||||
Drives_construct | WBCnstr00012693 | |||||
WBCnstr00015250 | ||||||
WBCnstr00032116 | ||||||
Construct_product | WBCnstr00016548 | |||||
WBCnstr00016559 | ||||||
WBCnstr00032116 | ||||||
Microarray_results (18) | ||||||
Expression_cluster (113) | ||||||
Interaction (246) | ||||||
Map_info | Positive | Positive_clone | F38C2 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | IV | 14.7534 | ||||
Method | Gene |