WormBase Tree Display for Gene: WBGene00009544
expand all nodes | collapse all nodes | view schema
| WBGene00009544 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F38E11.9 | |||||||
| Molecular_name | F38E11.9 | ||||||||
| F38E11.9.1 | |||||||||
| CE26625 | |||||||||
| Other_name | CELE_F38E11.9 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | F38E11.9 | ||||||||
| DB_info | Database | AceView | gene | 4K206 | |||||
| WormQTL | gene | WBGene00009544 | |||||||
| WormFlux | gene | WBGene00009544 | |||||||
| NDB | locus_tag | CELE_F38E11.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009544|UniProtKB=G5EFJ1 | |||||||
| family | PTHR37432 | ||||||||
| NCBI | gene | 177776 | |||||||
| RefSeq | protein | NM_069265.6 | |||||||
| TREEFAM | TREEFAM_ID | TF352612 | |||||||
| TrEMBL | UniProtAcc | G5EFJ1 | |||||||
| UniProt_GCRP | UniProtAcc | G5EFJ1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (17) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Paralog | WBGene00014219 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00015638 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in head mesodermal cell; intestine; neurons; and somatic gonad precursor based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including skn-1; daf-12; and hsf-1 based on tiling array; microarray; and RNA-seq studies. Is affected by eight chemicals including metformin; Sirolimus; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F38E11.9 | |||||||
| Corresponding_CDS_history | F38E11.9:wp34 | ||||||||
| Corresponding_transcript | F38E11.9.1 | ||||||||
| Associated_feature | WBsf652060 | ||||||||
| WBsf981805 | |||||||||
| WBsf997421 | |||||||||
| WBsf1017964 | |||||||||
| WBsf230570 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00014573 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00046723 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028211 | ||||||||
| Expr1034171 | |||||||||
| Expr1150603 | |||||||||
| Expr2003482 | |||||||||
| Expr2021697 | |||||||||
| Drives_construct | WBCnstr00032112 | ||||||||
| Construct_product | WBCnstr00032112 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (74) | |||||||||
| Interaction | WBInteraction000254772 | ||||||||
| WBInteraction000292047 | |||||||||
| WBInteraction000378806 | |||||||||
| WBInteraction000434299 | |||||||||
| WBInteraction000444486 | |||||||||
| Map_info | Positive | Positive_clone | F38E11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 4.24999 | |||||||
| Method | Gene |
