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WormBase Tree Display for Gene: WBGene00009599

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Name Class

WBGene00009599SMapS_parentSequenceF40G12
IdentityVersion1
NameSequence_nameF40G12.4
Molecular_nameF40G12.4
F40G12.4.1
CE30075
Other_nameCELE_F40G12.4Accession_evidenceNDBBX284605
Public_nameF40G12.4
DB_infoDatabaseAceViewgene5O748
WormQTLgeneWBGene00009599
WormFluxgeneWBGene00009599
NDBlocus_tagCELE_F40G12.4
PanthergeneCAEEL|WormBase=WBGene00009599|UniProtKB=Q20250
familyPTHR31897
NCBIgene185564
RefSeqproteinNM_074130.3
TREEFAMTREEFAM_IDTF315866
TrEMBLUniProtAccQ20250
UniProt_GCRPUniProtAccQ20250
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (19)
RNASeq_FPKM (74)
OrthologWBGene00127818Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00027332Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00152520Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00080962Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
CSP26.g19715Caenorhabditis zanzibariFrom_analysisWormBase-Compara
Csp5_scaffold_02138.g25051Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_11311Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_020302Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrV_pilon.g16469Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (27)
Structured_descriptionAutomated_descriptionEnriched in amphid sheath cell and germ line based on RNA-seq studies. Is affected by several genes including rrf-3; pgl-1; and eri-1 based on tiling array; microarray; and RNA-seq studies. Is affected by seven chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF19 and Domain of unknown function (DUF19).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF40G12.4
Corresponding_CDS_historyF40G12.4:wp70
Corresponding_transcriptF40G12.4.1
Experimental_infoRNAi_resultWBRNAi00046897Inferred_automaticallyRNAi_primary
WBRNAi00014680Inferred_automaticallyRNAi_primary
WBRNAi00032048Inferred_automaticallyRNAi_primary
Expr_patternExpr1028078
Expr1034201
Expr1150764
Drives_constructWBCnstr00032070
Construct_productWBCnstr00032070
Microarray_results (18)
Expression_cluster (35)
InteractionWBInteraction000370224
Map_infoPositivePositive_cloneF40G12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV6.21682
MethodGene