WormBase Tree Display for Gene: WBGene00009601
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| WBGene00009601 | SMap | S_parent | Sequence | F40G12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F40G12.6 | |||||||
| Molecular_name | F40G12.6 | ||||||||
| F40G12.6.1 | |||||||||
| CE10186 | |||||||||
| Other_name | CELE_F40G12.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F40G12.6 | ||||||||
| DB_info | Database | AceView | gene | 5O752 | |||||
| WormQTL | gene | WBGene00009601 | |||||||
| WormFlux | gene | WBGene00009601 | |||||||
| NDB | locus_tag | CELE_F40G12.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009601|UniProtKB=Q20245 | |||||||
| family | PTHR31897 | ||||||||
| NCBI | gene | 185566 | |||||||
| RefSeq | protein | NM_074132.2 | |||||||
| TREEFAM | TREEFAM_ID | TF315866 | |||||||
| TrEMBL | UniProtAcc | Q20245 | |||||||
| UniProt_GCRP | UniProtAcc | Q20245 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (34) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (11) | |||||||||
| Paralog (27) | |||||||||
| Structured_description | Automated_description | Enriched in AMshL; AMshR; amphid sheath cell; and arc ant V based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; let-60; and elt-2 based on tiling array; microarray; and RNA-seq studies. Is affected by eleven chemicals including metformin; Sirolimus; and Rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF19 and Domain of unknown function (DUF19). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F40G12.6 | |||||||
| Corresponding_transcript | F40G12.6.1 | ||||||||
| Associated_feature | WBsf653373 | ||||||||
| WBsf234925 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032050 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014682 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046899 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022357 | ||||||||
| Expr1150766 | |||||||||
| Expr2003548 | |||||||||
| Expr2021765 | |||||||||
| Drives_construct | WBCnstr00032068 | ||||||||
| Construct_product | WBCnstr00032068 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (84) | |||||||||
| Interaction | WBInteraction000203552 | ||||||||
| WBInteraction000294115 | |||||||||
| WBInteraction000437089 | |||||||||
| Map_info | Positive | Positive_clone | F40G12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 6.21794 | |||||||
| Method | Gene |
