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WormBase Tree Display for Gene: WBGene00009705

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Name Class

WBGene00009705SMapS_parentSequenceF44F4
IdentityVersion1
NameSequence_nameF44F4.10
Molecular_nameF44F4.10
F44F4.10.1
CE00997
Other_nameCELE_F44F4.10Accession_evidenceNDBBX284602
Public_nameF44F4.10
DB_infoDatabaseAceViewgene2L206
WormQTLgeneWBGene00009705
WormFluxgeneWBGene00009705
NDBlocus_tagCELE_F44F4.10
PanthergeneCAEEL|WormBase=WBGene00009705|UniProtKB=Q20408
familyPTHR31128
NCBIgene185752
RefSeqproteinNM_063949.2
TREEFAMTREEFAM_IDTF315835
TrEMBLUniProtAccQ20408
UniProt_GCRPUniProtAccQ20408
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (31)
RNASeq_FPKM (74)
Ortholog (31)
ParalogWBGene00009321Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009643Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00044684Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00013590Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015034Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020377Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00015820Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionF44F4.1 encodes a nematode-specific sperm protein probably required for a normally high ovulation rate; F44F4.1 has no obvious non-nematode homologs, but does have a putative central coiled-coil domain, and is is paralogous to four other C. elegans proteins (B0207.11, F42G4.6, T08G11.2, and Y81G3A.1); F44F4.1(tm332) hermaphrodites show abnormal egg-laying, retaining significantly fewer eggs than wild-type (perhaps due to a lowered ovulation rate) while retaining late-stage embryos; F44F4.1 has no obvious phenotype in mass RNAi experiments, possibly because of genetic redundancy with its paralogs; F44F4.1 expression is enriched in spermatogenesis.Paper_evidenceWBPaper00006390
WBPaper00029335
Curator_confirmedWBPerson567
Date_last_updated23 Jul 2007 00:00:00
Automated_descriptionEnriched in germ line and in male based on proteomic and RNA-seq studies. Is affected by several genes including daf-2; eat-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including methylmercuric chloride; manganese chloride; and D-glucose based on microarray and RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF44F4.10
Corresponding_transcriptF44F4.10.1
Other_sequenceCJC02469_1
Associated_featureWBsf223859
Experimental_infoRNAi_resultWBRNAi00047316Inferred_automaticallyRNAi_primary
WBRNAi00047121Inferred_automaticallyRNAi_primary
WBRNAi00032256Inferred_automaticallyRNAi_primary
WBRNAi00014952Inferred_automaticallyRNAi_primary
Expr_patternExpr1023769
Expr1034245
Expr1151168
Expr2021949
Microarray_results (19)
Expression_cluster (126)
Interaction (186)
Map_infoPositivePositive_cloneF44F4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII3.13303
ReferenceWBPaper00029335
MethodGene