WormBase Tree Display for Gene: WBGene00009841
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| WBGene00009841 | SMap | S_parent | Sequence | F47H4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-134 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F47H4.11 | ||||||||
| Molecular_name | F47H4.11 | ||||||||
| F47H4.11.1 | |||||||||
| CE50217 | |||||||||
| Other_name | CELE_F47H4.11 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | fbxa-134 | ||||||||
| DB_info | Database | AceView | gene | 5R832 | |||||
| WormQTL | gene | WBGene00009841 | |||||||
| WormFlux | gene | WBGene00009841 | |||||||
| NDB | locus_tag | CELE_F47H4.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009841|UniProtKB=Q9XU26 | |||||||
| family | PTHR23014 | ||||||||
| NCBI | gene | 185956 | |||||||
| RefSeq | protein | NM_074994.3 | |||||||
| TrEMBL | UniProtAcc | Q9XU26 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XU26 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-134 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (131) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00027443 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| WBGene00039349 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| chrV_pilon.g17434 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Is affected by several genes including eat-2; sir-2.1; and lin-22 based on microarray and RNA-seq studies. Is affected by multi-walled carbon nanotube and Zidovudine based on RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F47H4.11 | |||||||
| Corresponding_CDS_history | F47H4.11:wp193 | ||||||||
| F47H4.11:wp245 | |||||||||
| Corresponding_transcript | F47H4.11.1 | ||||||||
| Associated_feature | WBsf653511 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00047701 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015218 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011595 | ||||||||
| Expr1151538 | |||||||||
| Expr2011469 | |||||||||
| Expr2029708 | |||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (44) | |||||||||
| Interaction | WBInteraction000329069 | ||||||||
| WBInteraction000338967 | |||||||||
| WBInteraction000447683 | |||||||||
| Map_info | Map | V | Position | 12.8891 | Error | 0.001048 | |||
| Positive | Positive_clone | F47H4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
