WormBase Tree Display for Gene: WBGene00009869
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| WBGene00009869 | SMap | S_parent | Sequence | F49C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F49C5.7 | |||||||
| Molecular_name | F49C5.7 | ||||||||
| F49C5.7.1 | |||||||||
| CE53956 | |||||||||
| Other_name | CELE_F49C5.7 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F49C5.7 | ||||||||
| DB_info | Database | AceView | gene | 2M857 | |||||
| WormQTL | gene | WBGene00009869 | |||||||
| WormFlux | gene | WBGene00009869 | |||||||
| NDB | locus_tag | CELE_F49C5.7 | |||||||
| NCBI | gene | 186018 | |||||||
| RefSeq | protein | NM_001377883.1 | |||||||
| TREEFAM | TREEFAM_ID | TF322956 | |||||||
| TrEMBL | UniProtAcc | O17881 | |||||||
| UniProt_GCRP | UniProtAcc | O17881 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (74) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00127198 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | |||||
| WBGene00208373 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| FL83_14633 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| chrII_pilon.g6208 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00016430 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021801 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in M cell; XXX cell; and ciliated neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including eat-2; clk-1; and csr-1 based on microarray; tiling array; and RNA-seq studies. Is affected by allantoin and Sirolimus based on microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F49C5.7 | |||||||
| Corresponding_CDS_history | F49C5.7:wp188 | ||||||||
| F49C5.7:wp274 | |||||||||
| Corresponding_transcript | F49C5.7.1 | ||||||||
| Associated_feature | WBsf990140 | ||||||||
| WBsf990141 | |||||||||
| WBsf1013458 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00047820 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015298 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015054 | ||||||||
| Expr1151654 | |||||||||
| Expr2003925 | |||||||||
| Expr2022147 | |||||||||
| Drives_construct | WBCnstr00031859 | ||||||||
| Construct_product | WBCnstr00031859 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (39) | |||||||||
| Interaction (30) | |||||||||
| Map_info | Positive | Positive_clone | F49C5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 10.3358 | |||||||
| Reference | WBPaper00063946 | ||||||||
| Method | Gene |
