WormBase Tree Display for Gene: WBGene00009976
expand all nodes | collapse all nodes | view schema
| WBGene00009976 | SMap | S_parent | Sequence | F53C11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | swan-2 | Person_evidence | WBPerson389 | |||||
| Sequence_name | F53C11.7 | ||||||||
| Molecular_name | F53C11.7 | ||||||||
| F53C11.7.1 | |||||||||
| CE24997 | |||||||||
| F53C11.7.2 | |||||||||
| Other_name | tag-206 | Person_evidence | WBPerson201 | ||||||
| CELE_F53C11.7 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | swan-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Dec 2004 16:59:41 | WBPerson2970 | Name_change | CGC_name | tag-206 | ||||
| 3 | 28 Jul 2005 14:05:42 | WBPerson2970 | Name_change | CGC_name | swan-2 | ||||
| Other_name | tag-206 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | swan | ||||||||
| Allele (51) | |||||||||
| Strain | WBStrain00003132 | ||||||||
| WBStrain00003133 | |||||||||
| WBStrain00035964 | |||||||||
| WBStrain00022436 | |||||||||
| WBStrain00022437 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00086554 | ||||||||
| 00086555 | |||||||||
| 00086556 | |||||||||
| 00086557 | |||||||||
| Contained_in_operon | CEOP5400 | ||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00009977 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Involved in response to heat and response to osmotic stress. Predicted to be located in nucleus. Expressed in head. Is an ortholog of human DCAF7 (DDB1 and CUL4 associated factor 7). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F53C11.7 | |||||||
| Corresponding_transcript | F53C11.7.1 | ||||||||
| F53C11.7.2 | |||||||||
| Other_sequence (51) | |||||||||
| Associated_feature | WBsf653347 | ||||||||
| WBsf234866 | |||||||||
| WBsf234867 | |||||||||
| WBsf234868 | |||||||||
| WBsf234869 | |||||||||
| WBsf234870 | |||||||||
| WBsf234871 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00103047 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032684 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015492 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00084261 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048105 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1938 | ||||||||
| Expr6150 | |||||||||
| Expr6151 | |||||||||
| Expr1018661 | |||||||||
| Expr1034347 | |||||||||
| Expr1151915 | |||||||||
| Expr2017149 | |||||||||
| Expr2035285 | |||||||||
| Drives_construct | WBCnstr00003615 | ||||||||
| WBCnstr00003616 | |||||||||
| WBCnstr00031771 | |||||||||
| Construct_product | WBCnstr00031771 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (112) | |||||||||
| Interaction (55) | |||||||||
| Map_info | Map | V | Position | 5.5882 | Error | 0.00117 | |||
| Positive | Positive_clone | F53C11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4873 | |||||||
| 5333 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028497 | ||||||||
| WBPaper00032186 | |||||||||
| WBPaper00033115 | |||||||||
| WBPaper00037719 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
