WormBase Tree Display for Gene: WBGene00010009
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| WBGene00010009 | SMap | S_parent | Sequence | F53H4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F53H4.4 | |||||||
| Molecular_name | F53H4.4 | ||||||||
| F53H4.4.1 | |||||||||
| CE17863 | |||||||||
| F53H4.4.2 | |||||||||
| Other_name | CELE_F53H4.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F53H4.4 | ||||||||
| DB_info | Database | AceView | gene | XQ485 | |||||
| WormQTL | gene | WBGene00010009 | |||||||
| WormFlux | gene | WBGene00010009 | |||||||
| NDB | locus_tag | CELE_F53H4.4 | |||||||
| NCBI | gene | 181675 | |||||||
| RefSeq | protein | NM_078208.7 | |||||||
| TREEFAM | TREEFAM_ID | TF316305 | |||||||
| TrEMBL | UniProtAcc | Q93780 | |||||||
| UniProt_GCRP | UniProtAcc | Q93780 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (49) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (16) | |||||||||
| Structured_description | Automated_description | Enriched in muscle cell; neurons; and somatic gonad precursor based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; eat-2; and pgl-1 based on microarray; RNA-seq; and tiling array studies. Is affected by nine chemicals including Cry5B; Psoralens; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F53H4.4 | |||||||
| Corresponding_transcript | F53H4.4.1 | ||||||||
| F53H4.4.2 | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032722 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015551 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048197 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002232 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013751 | ||||||||
| Expr1034361 | |||||||||
| Expr1152007 | |||||||||
| Expr2004100 | |||||||||
| Expr2022325 | |||||||||
| Drives_construct | WBCnstr00031745 | ||||||||
| Construct_product | WBCnstr00031745 | ||||||||
| Microarray_results (29) | |||||||||
| Expression_cluster (88) | |||||||||
| Interaction | WBInteraction000272746 | ||||||||
| WBInteraction000273772 | |||||||||
| WBInteraction000278530 | |||||||||
| WBInteraction000315813 | |||||||||
| WBInteraction000372654 | |||||||||
| WBInteraction000381252 | |||||||||
| WBInteraction000416606 | |||||||||
| WBInteraction000428026 | |||||||||
| WBInteraction000450518 | |||||||||
| Map_info | Positive | Positive_clone | F53H4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 22.9631 | |||||||
| Reference | WBPaper00041771 | ||||||||
| Method | Gene |
