WormBase Tree Display for Gene: WBGene00010049
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| WBGene00010049 | SMap | S_parent | Sequence | F54D5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F54D5.3 | |||||||
| Molecular_name | F54D5.3 | ||||||||
| F54D5.3.1 | |||||||||
| CE28033 | |||||||||
| Other_name | CELE_F54D5.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F54D5.3 | ||||||||
| DB_info | Database | AceView | gene | 2L863 | |||||
| WormQTL | gene | WBGene00010049 | |||||||
| WormFlux | gene | WBGene00010049 | |||||||
| NDB | locus_tag | CELE_F54D5.3 | |||||||
| NCBI | gene | 174773 | |||||||
| RefSeq | protein | NM_064072.7 | |||||||
| TREEFAM | TREEFAM_ID | TF318747 | |||||||
| TrEMBL | UniProtAcc | Q20769 | |||||||
| UniProt_GCRP | UniProtAcc | Q20769 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (27) | |||||||||
| Strain | WBStrain00037110 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Paralog | WBGene00010050 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enriched in head mesodermal cell; intestine; and pharyngeal muscle cell based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by nineteen chemicals including rotenone; stavudine; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF5352 and Family of unknown function (DUF5352). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F54D5.3 | |||||||
| Corresponding_CDS_history | F54D5.3:wp52 | ||||||||
| Corresponding_transcript | F54D5.3.1 | ||||||||
| Other_sequence | CBC10441_1 | ||||||||
| PT04147 | |||||||||
| PT03718 | |||||||||
| HC07033 | |||||||||
| PTC03607_1 | |||||||||
| PTC03484_1 | |||||||||
| ES741077.1 | |||||||||
| Associated_feature | WBsf644701 | ||||||||
| WBsf644702 | |||||||||
| WBsf989808 | |||||||||
| WBsf989809 | |||||||||
| WBsf989810 | |||||||||
| WBsf222159 | |||||||||
| WBsf222160 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015620 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048313 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032791 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061295 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3240 | ||||||||
| Expr1014628 | |||||||||
| Expr1034381 | |||||||||
| Expr1152115 | |||||||||
| Expr2004153 | |||||||||
| Expr2022377 | |||||||||
| Drives_construct | WBCnstr00031708 | ||||||||
| Construct_product | WBCnstr00031708 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (245) | |||||||||
| Interaction (186) | |||||||||
| WBProcess | WBbiopr:00000039 | ||||||||
| Map_info | Positive | Positive_clone | F54D5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 3.76608 | |||||||
| Reference | WBPaper00025081 | ||||||||
| WBPaper00041339 | |||||||||
| Method | Gene |
