WormBase Tree Display for Gene: WBGene00010179
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| WBGene00010179 | SMap | S_parent | Sequence | F57A8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | npr-39 | Person_evidence | WBPerson11490 | |||||
| Laboratory_evidence | AX | ||||||||
| Sequence_name | F57A8.4 | ||||||||
| Molecular_name | F57A8.4 | ||||||||
| F57A8.4.1 | |||||||||
| CE05985 | |||||||||
| Other_name | F57A8.4 | ||||||||
| CELE_F57A8.4 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | npr-39 | ||||||||
| DB_info | Database | AceView | gene | 5K547 | |||||
| WormQTL | gene | WBGene00010179 | |||||||
| WormFlux | gene | WBGene00010179 | |||||||
| NDB | locus_tag | CELE_F57A8.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010179|UniProtKB=Q20915 | |||||||
| family | PTHR46709 | ||||||||
| NCBI | gene | 186430 | |||||||
| RefSeq | protein | NM_073182.5 | |||||||
| TREEFAM | TREEFAM_ID | TF315321 | |||||||
| TrEMBL | UniProtAcc | Q20915 | |||||||
| UniProt_GCRP | UniProtAcc | Q20915 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 29 Sep 2022 22:37:18 | WBPerson21950 | Name_change | CGC_name | npr-39 | ||||
| Other_name | F57A8.4 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | npr | ||||||||
| Allele (31) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00069553 | ||||||||
| 00117641 | |||||||||
| 00117642 | |||||||||
| 00117643 | |||||||||
| Ortholog (27) | |||||||||
| Paralog (187) | |||||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F57A8.4 | |||||||
| Corresponding_transcript | F57A8.4.1 | ||||||||
| Other_sequence | CSC01329_1 | ||||||||
| JI217310.1 | |||||||||
| Dviv_isotig24795 | |||||||||
| FD515968.1 | |||||||||
| Associated_feature | WBsf232324 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00048803 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00033000 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032999 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015864 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024333 | ||||||||
| Expr1152557 | |||||||||
| Expr2004330 | |||||||||
| Expr2022555 | |||||||||
| Drives_construct | WBCnstr00031605 | ||||||||
| Construct_product | WBCnstr00031605 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (96) | |||||||||
| Interaction | WBInteraction000307393 | ||||||||
| WBInteraction000321219 | |||||||||
| WBInteraction000335847 | |||||||||
| WBInteraction000362334 | |||||||||
| WBInteraction000395415 | |||||||||
| WBInteraction000431563 | |||||||||
| Map_info | Map | V | Position | 2.24459 | |||||
| Positive | Positive_clone | F57A8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00032078 | ||||||||
| WBPaper00041267 | |||||||||
| WBPaper00065946 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
