WormBase Tree Display for Gene: WBGene00010212

WBGene00010212 SMap: S_parent: Sequence: F57G4
  Identity: Version: 2
    Name: CGC_name: fbxa-192 Person_evidence: WBPerson655
      Sequence_name: F57G4.8
      Molecular_name: F57G4.8
        F57G4.8.1
        CE40854
      Other_name: CELE_F57G4.8 Accession_evidence: NDB BX284605
      Public_name: fbxa-192
    DB_info: Database: AceView gene 5S128
        WormQTL gene WBGene00010212
        WormFlux gene WBGene00010212
        NDB locus_tag CELE_F57G4.8
        Panther gene CAEEL|WormBase=WBGene00010212|UniProtKB=Q9XUX2
          family PTHR23015
        NCBI gene 186462
        RefSeq protein NM_075064.3
        TREEFAM TREEFAM_ID TF322954
        TrEMBL UniProtAcc Q9XUX2
        UniProt_GCRP UniProtAcc Q9XUX2
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 01 Mar 2007 11:55:19 WBPerson2970 Name_change: CGC_name: fbxa-192
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (153)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP5460
    Ortholog (27)
    Paralog (222)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in germ line; neurons; and retrovesicular ganglion based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray; tiling array; and RNA-seq studies. Is affected by eight chemicals including manganese chloride; Sirolimus; and Rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; Mos1 transposase, HTH domain; FTH domain; HTH domain in Mos1 transposase; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F57G4.8
    Corresponding_CDS_history: F57G4.8:wp173
    Corresponding_transcript: F57G4.8.1
    Associated_feature: WBsf669821
      WBsf669822
      WBsf669823
      WBsf1002702
      WBsf1002703
      WBsf1002704
      WBsf1021316
      WBsf1021317
      WBsf1021318
  Experimental_info: RNAi_result: WBRNAi00048897 Inferred_automatically: RNAi_primary
      WBRNAi00097101 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022407
      Expr1034454
      Expr1152638
      Expr2011509
      Expr2029746
    Drives_construct: WBCnstr00031581
    Construct_product: WBCnstr00031581
    Microarray_results (15)
    Expression_cluster (216)
    Interaction (26)
  Map_info: Map: V Position: 12.9436 Error: 0.002683
    Positive: Positive_clone: F57G4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
    WBPaper00028483
    WBPaper00044753
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene