WormBase Tree Display for Gene: WBGene00010233
expand all nodes | collapse all nodes | view schema
| WBGene00010233 | SMap | S_parent | Sequence | F58B3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rbm-17 | Person_evidence | WBPerson260 | |||||
| Sequence_name | F58B3.7 | ||||||||
| Molecular_name | F58B3.7 | ||||||||
| F58B3.7.1 | |||||||||
| CE06009 | |||||||||
| Other_name | CELE_F58B3.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | rbm-17 | ||||||||
| DB_info | Database | AceView | gene | 4M403 | |||||
| WormQTL | gene | WBGene00010233 | |||||||
| WormFlux | gene | WBGene00010233 | |||||||
| NDB | locus_tag | CELE_F58B3.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010233|UniProtKB=Q20966 | |||||||
| family | PTHR13288 | ||||||||
| NCBI | gene | 178091 | |||||||
| RefSeq | protein | NM_069797.7 | |||||||
| TREEFAM | TREEFAM_ID | TF313987 | |||||||
| TrEMBL | UniProtAcc | Q20966 | |||||||
| UniProt_GCRP | UniProtAcc | Q20966 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 07 Dec 2017 13:24:47 | WBPerson1983 | Name_change | CGC_name | rbm-17 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rbm | ||||||||
| Allele (33) | |||||||||
| Strain | WBStrain00036677 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Contained_in_operon | CEOP4464 | ||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00004389 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in alternative mRNA splicing, via spliceosome. Predicted to be located in nucleoplasm. Predicted to be part of spliceosomal complex. Is an ortholog of human RBM17 (RNA binding motif protein 17). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F58B3.7 | |||||||
| Corresponding_transcript | F58B3.7.1 | ||||||||
| Other_sequence (49) | |||||||||
| Associated_feature | WBsf229182 | ||||||||
| WBsf229183 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00048953 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1011634 | ||||||||
| Expr1034464 | |||||||||
| Expr1152690 | |||||||||
| Expr2004375 | |||||||||
| Expr2022599 | |||||||||
| Drives_construct | WBCnstr00031566 | ||||||||
| Construct_product | WBCnstr00031566 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (122) | |||||||||
| Interaction (50) | |||||||||
| Map_info | Map | IV | Position | 5.09675 | |||||
| Positive | Positive_clone | F58B3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00013105 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
