WormBase Tree Display for Gene: WBGene00010234
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| WBGene00010234 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ttr-50 | |||||||
| Sequence_name | F58B3.9 | ||||||||
| Molecular_name | F58B3.9 | ||||||||
| F58B3.9.1 | |||||||||
| CE11362 | |||||||||
| Other_name | CELE_F58B3.9 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ttr-50 | ||||||||
| DB_info | Database | AceView | gene | 4M404 | |||||
| WormQTL | gene | WBGene00010234 | |||||||
| WormFlux | gene | WBGene00010234 | |||||||
| NDB | locus_tag | CELE_F58B3.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010234|UniProtKB=G5EE48 | |||||||
| family | PTHR21700 | ||||||||
| NCBI | gene | 178092 | |||||||
| RefSeq | protein | NM_069798.5 | |||||||
| TREEFAM | TREEFAM_ID | TF315773 | |||||||
| TrEMBL | UniProtAcc | G5EE48 | |||||||
| UniProt_GCRP | UniProtAcc | G5EE48 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-50 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ttr | ||||||||
| Allele (16) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00015397 | ||||||||
| 00117686 | |||||||||
| Ortholog (29) | |||||||||
| Paralog (62) | |||||||||
| Structured_description | Automated_description | Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F58B3.9 | |||||||
| Corresponding_transcript | F58B3.9.1 | ||||||||
| Other_sequence | CRC06481_1 | ||||||||
| CR00799 | |||||||||
| FK805396.1 | |||||||||
| CBC17442_1 | |||||||||
| CJC00565_1 | |||||||||
| Associated_feature | WBsf652235 | ||||||||
| WBsf668355 | |||||||||
| WBsf668356 | |||||||||
| WBsf668357 | |||||||||
| WBsf668358 | |||||||||
| WBsf230904 | |||||||||
| WBsf230905 | |||||||||
| WBsf230906 | |||||||||
| WBsf230907 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00033076 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00022386 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062284 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048955 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021309 | ||||||||
| Expr1034465 | |||||||||
| Expr1152692 | |||||||||
| Expr2017617 | |||||||||
| Expr2035755 | |||||||||
| Drives_construct | WBCnstr00031565 | ||||||||
| Construct_product | WBCnstr00031565 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (274) | |||||||||
| Interaction (102) | |||||||||
| Map_info | Map | IV | Position | 5.09773 | Error | 0.002092 | |||
| Positive | Positive_clone | F58B3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00033090 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
