WormBase Tree Display for Gene: WBGene00010310
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WBGene00010310 | SMap | S_parent | Sequence | F59B2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F59B2.8 | |||||||
Molecular_name | F59B2.8 | ||||||||
F59B2.8.1 | |||||||||
CE00235 | |||||||||
Other_name | CELE_F59B2.8 | Accession_evidence | NDB | BX284603 | |||||
Public_name | F59B2.8 | ||||||||
DB_info | Database | AceView | gene | 3K96 | |||||
WormQTL | gene | WBGene00010310 | |||||||
WormFlux | gene | WBGene00010310 | |||||||
NDB | locus_tag | CELE_F59B2.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010310|UniProtKB=P34483 | |||||||
family | PTHR21503 | ||||||||
NCBI | gene | 186593 | |||||||
RefSeq | protein | NM_066593.3 | |||||||
SwissProt | UniProtAcc | P34483 | |||||||
TREEFAM | TREEFAM_ID | TF316347 | |||||||
UniProt_GCRP | UniProtAcc | P34483 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (34) | |||||||||
Strain | WBStrain00036855 | ||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (17) | |||||||||
Paralog (57) | |||||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enriched in several structures, including ABarpapaaa; DB neuron; accessory cell; interneuron; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; rrf-3; and eat-2 based on microarray and RNA-seq studies. Is affected by nineteen chemicals including 1-methylnicotinamide; methylmercuric chloride; and bisphenol S based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F59B2.8 | |||||||
Corresponding_transcript | F59B2.8.1 | ||||||||
Associated_feature | WBsf651329 | ||||||||
WBsf993547 | |||||||||
WBsf227223 | |||||||||
Experimental_info | RNAi_result | WBRNAi00078705 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00005462 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00078737 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00033186 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00078767 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00078773 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00049152 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00078801 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00016082 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022148 | ||||||||
Expr1034500 | |||||||||
Expr1152895 | |||||||||
Expr2004462 | |||||||||
Expr2022685 | |||||||||
Drives_construct | WBCnstr00031515 | ||||||||
Construct_product | WBCnstr00031515 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (137) | |||||||||
Interaction (18) | |||||||||
Map_info | Positive | Positive_clone | F59B2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | 0.0847712 | |||||||
Reference | WBPaper00012854 | ||||||||
WBPaper00029221 | |||||||||
Method | Gene |