WormBase Tree Display for Gene: WBGene00010554
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WBGene00010554 | SMap | S_parent | Sequence | K04C1 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | mlc-6 | Person_evidence | WBPerson260 | |||||
Sequence_name | K04C1.4 | ||||||||
Molecular_name | K04C1.4 | ||||||||
K04C1.4.1 | |||||||||
CE35578 | |||||||||
Other_name | CELE_K04C1.4 | Accession_evidence | NDB | BX284606 | |||||
Public_name | mlc-6 | ||||||||
DB_info | Database | AceView | gene | XO864 | |||||
WormQTL | gene | WBGene00010554 | |||||||
WormFlux | gene | WBGene00010554 | |||||||
NDB | locus_tag | CELE_K04C1.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010554|UniProtKB=Q21201 | |||||||
family | PTHR23048 | ||||||||
NCBI | gene | 186979 | |||||||
RefSeq | protein | NM_077974.5 | |||||||
TrEMBL | UniProtAcc | Q21201 | |||||||
UniProt_GCRP | UniProtAcc | Q21201 | |||||||
OMIM | gene | 160770 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 03 May 2013 15:28:52 | WBPerson2970 | Name_change | CGC_name | mlc-6 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | mlc | ||||||||
Allele (24) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00070645 | ||||||||
00117908 | |||||||||
Ortholog (28) | |||||||||
Paralog | WBGene00003371 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00009585 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00011734 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00023451 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Predicted to be part of myosin II complex. Human ortholog(s) of this gene implicated in cardiomyopathy and familial atrial fibrillation. Is an ortholog of human MYL4 (myosin light chain 4); MYL6 (myosin light chain 6); and MYL6B (myosin light chain 6B). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:0050650 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7585) | ||||
DOID:0050700 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:7585) | ||||||
Molecular_info | Corresponding_CDS | K04C1.4 | |||||||
Corresponding_CDS_history | K04C1.4:wp109 | ||||||||
Corresponding_transcript | K04C1.4.1 | ||||||||
Associated_feature | WBsf1007861 | ||||||||
WBsf238215 | |||||||||
WBsf238216 | |||||||||
Experimental_info | RNAi_result | WBRNAi00033937 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00049885 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022167 | ||||||||
Expr1153590 | |||||||||
Expr2013594 | |||||||||
Expr2031827 | |||||||||
Drives_construct | WBCnstr00031330 | ||||||||
Construct_product | WBCnstr00031330 | ||||||||
Microarray_results (15) | |||||||||
Expression_cluster (98) | |||||||||
Interaction | WBInteraction000169930 | ||||||||
WBInteraction000179733 | |||||||||
WBInteraction000240464 | |||||||||
WBInteraction000288414 | |||||||||
WBInteraction000325695 | |||||||||
WBInteraction000416998 | |||||||||
WBInteraction000417025 | |||||||||
WBInteraction000540107 | |||||||||
WBInteraction000561155 | |||||||||
WBInteraction000564058 | |||||||||
Map_info | Map | X | Position | 16.6704 | |||||
Positive | Positive_clone | K04C1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |