WormBase Tree Display for Gene: WBGene00010602
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WBGene00010602 | SMap | S_parent | Sequence | K06B4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nhr-197 | Person_evidence | WBPerson600 | |||||
Sequence_name | K06B4.7 | ||||||||
Molecular_name | K06B4.7 | ||||||||
K06B4.7.1 | |||||||||
CE25931 | |||||||||
Other_name | CELE_K06B4.7 | Accession_evidence | NDB | BX284605 | |||||
Public_name | nhr-197 | ||||||||
DB_info | Database | AceView | gene | 5Q167 | |||||
WormQTL | gene | WBGene00010602 | |||||||
WormFlux | gene | WBGene00010602 | |||||||
NDB | locus_tag | CELE_K06B4.7 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010602|UniProtKB=O17931 | |||||||
family | PTHR45886 | ||||||||
NCBI | gene | 187055 | |||||||
RefSeq | protein | NM_074500.3 | |||||||
SwissProt | UniProtAcc | O17931 | |||||||
TREEFAM | TREEFAM_ID | TF322922 | |||||||
UniProt_GCRP | UniProtAcc | O17931 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-197 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nhr | ||||||||
Allele (56) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00031079 | ||||||||
00031080 | |||||||||
00031081 | |||||||||
00031082 | |||||||||
00117949 | |||||||||
00117950 | |||||||||
00117951 | |||||||||
00117952 | |||||||||
Ortholog (29) | |||||||||
Paralog (219) | |||||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | K06B4.7 | |||||||
Corresponding_CDS_history | K06B4.7:wp20 | ||||||||
Corresponding_transcript | K06B4.7.1 | ||||||||
Associated_feature | WBsf647606 | ||||||||
WBsf978614 | |||||||||
WBsf233041 | |||||||||
WBsf233042 | |||||||||
Transcription_factor | WBTranscriptionFactor000833 | ||||||||
Experimental_info | RNAi_result | WBRNAi00016669 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00034014 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00050046 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00115833 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1027519 | ||||||||
Expr1153741 | |||||||||
Expr2014099 | |||||||||
Expr2032338 | |||||||||
Microarray_results (14) | |||||||||
Expression_cluster (34) | |||||||||
Interaction (21) | |||||||||
Map_info | Map | V | Position | 8.63828 | Error | 0.003425 | |||
Positive | Positive_clone | K06B4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5314 | |||||||
5338 | |||||||||
5382 | |||||||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |