WormBase Tree Display for Gene: WBGene00010603
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WBGene00010603 | SMap | S_parent | Sequence | K06B4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nhr-198 | Person_evidence | WBPerson600 | |||||
Sequence_name | K06B4.8 | ||||||||
Molecular_name | K06B4.8 | ||||||||
K06B4.8.1 | |||||||||
CE35584 | |||||||||
Other_name | CELE_K06B4.8 | Accession_evidence | NDB | BX284605 | |||||
Public_name | nhr-198 | ||||||||
DB_info | Database | AceView | gene | 5Q173 | |||||
WormQTL | gene | WBGene00010603 | |||||||
WormFlux | gene | WBGene00010603 | |||||||
NDB | locus_tag | CELE_K06B4.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010603|UniProtKB=O45664 | |||||||
family | PTHR45886 | ||||||||
NCBI | gene | 187056 | |||||||
RefSeq | protein | NM_074502.2 | |||||||
TREEFAM | TREEFAM_ID | TF322922 | |||||||
TrEMBL | UniProtAcc | O45664 | |||||||
UniProt_GCRP | UniProtAcc | O45664 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-198 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nhr | ||||||||
Allele (99) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00034910 | ||||||||
00034911 | |||||||||
00034912 | |||||||||
00117953 | |||||||||
00117954 | |||||||||
00117955 | |||||||||
00117956 | |||||||||
Ortholog (29) | |||||||||
Paralog (218) | |||||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | K06B4.8 | |||||||
Corresponding_CDS_history | K06B4.8:wp109 | ||||||||
Corresponding_transcript | K06B4.8.1 | ||||||||
Other_sequence | BMC05879_1 | ||||||||
Associated_feature | WBsf978508 | ||||||||
Transcription_factor | WBTranscriptionFactor001035 | ||||||||
Experimental_info | RNAi_result | WBRNAi00050047 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00027401 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00016670 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00025886 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00034015 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1016311 | ||||||||
Expr1153742 | |||||||||
Expr2014100 | |||||||||
Expr2032339 | |||||||||
Microarray_results (18) | |||||||||
Expression_cluster (56) | |||||||||
Interaction | WBInteraction000188178 | ||||||||
WBInteraction000251473 | |||||||||
WBInteraction000252033 | |||||||||
WBInteraction000309111 | |||||||||
WBInteraction000398860 | |||||||||
Map_info | Map | V | Position | 8.65002 | Error | 0.0023 | |||
Positive | Positive_clone | K06B4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 5314 | |||||||
5338 | |||||||||
5402 | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00026592 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |