WormBase Tree Display for Gene: WBGene00010675
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WBGene00010675 | SMap | S_parent | Sequence | K08E7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | K08E7.8 | |||||||
Molecular_name | K08E7.8a | ||||||||
K08E7.8a.1 | |||||||||
CE11930 | |||||||||
K08E7.8b | |||||||||
CE39748 | |||||||||
K08E7.8b.1 | |||||||||
Other_name | CELE_K08E7.8 | Accession_evidence | NDB | BX284604 | |||||
Public_name | K08E7.8 | ||||||||
DB_info | Database | AceView | gene | 4N350 | |||||
WormQTL | gene | WBGene00010675 | |||||||
WormFlux | gene | WBGene00010675 | |||||||
NDB | locus_tag | CELE_K08E7.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010675|UniProtKB=Q21347 | |||||||
family | PTHR16083 | ||||||||
NCBI | gene | 178213 | |||||||
RefSeq | protein | NM_001047504.6 | |||||||
NM_001047505.3 | |||||||||
TREEFAM | TREEFAM_ID | TF319816 | |||||||
TrEMBL | UniProtAcc | Q21347 | |||||||
Q2EEN9 | |||||||||
UniProt_GCRP | UniProtAcc | Q21347 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (13) | |||||||||
Strain | WBStrain00002510 | ||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (34) | |||||||||
Structured_description | Automated_description | Enriched in intestine; muscle cell; and somatic gonad precursor based on Chronogram; tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; dpy-10; and hsf-1 based on RNA-seq and microarray studies. Is affected by eight chemicals including Zidovudine; Rifampin; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Leucine-rich repeat; Leucine-rich repeat domain superfamily; and Leucine rich repeat. Is an ortholog of human LRRC20 (leucine rich repeat containing 20). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | K08E7.8a | |||||||
K08E7.8b | |||||||||
Corresponding_transcript | K08E7.8a.1 | ||||||||
K08E7.8b.1 | |||||||||
Other_sequence | HC07104 | ||||||||
Tcol_isotig14701 | |||||||||
Oden_isotig13750 | |||||||||
Associated_feature | WBsf652304 | ||||||||
WBsf998164 | |||||||||
WBsf998165 | |||||||||
WBsf998166 | |||||||||
WBsf998167 | |||||||||
WBsf1018396 | |||||||||
WBsf231040 | |||||||||
Experimental_info | RNAi_result | WBRNAi00050310 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00016819 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00034148 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram1632 | ||||||||
Expr6367 | |||||||||
Expr1023181 | |||||||||
Expr1154011 | |||||||||
Expr2004934 | |||||||||
Expr2023156 | |||||||||
Drives_construct | WBCnstr00003090 | ||||||||
WBCnstr00031231 | |||||||||
Construct_product | WBCnstr00031231 | ||||||||
Microarray_results (22) | |||||||||
Expression_cluster (98) | |||||||||
Map_info | Positive | Positive_clone | K08E7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 6.06356 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |