WormBase Tree Display for Gene: WBGene00010714
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WBGene00010714 | SMap | S_parent | Sequence | K09B11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | mam-3 | Person_evidence | WBPerson3379 | |||||
Sequence_name | K09B11.10 | ||||||||
Molecular_name | K09B11.10 | ||||||||
K09B11.10.1 | |||||||||
CE40568 | |||||||||
Other_name | CELE_K09B11.10 | Accession_evidence | NDB | BX284604 | |||||
Public_name | mam-3 | ||||||||
DB_info | Database | AceView | gene | 4O200 | |||||
WormQTL | gene | WBGene00010714 | |||||||
WormFlux | gene | WBGene00010714 | |||||||
NDB | locus_tag | CELE_K09B11.10 | |||||||
NCBI | gene | 266652 | |||||||
RefSeq | protein | NM_070191.5 | |||||||
TREEFAM | TREEFAM_ID | TF319591 | |||||||
TrEMBL | UniProtAcc | Q9U3B4 | |||||||
UniProt_GCRP | UniProtAcc | Q9U3B4 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 08 Dec 2011 12:14:43 | WBPerson2970 | Name_change | CGC_name | mam-3 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | mam | ||||||||
Allele (132) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (32) | |||||||||
Paralog | WBGene00008150 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WormBase-Compara | |||||||||
WBGene00008605 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00009593 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00010359 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00011572 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00011836 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00019866 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00022504 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00044542 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in germline precursor cell; hypodermis; and tail hypodermis based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by fifteen chemicals including Ethanol; Nitric Oxide; and methylmercury hydroxide based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Concanavalin A-like lectin/glucanase domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | K09B11.10 | |||||||
Corresponding_CDS_history | K09B11.10:wp109 | ||||||||
K09B11.10:wp167 | |||||||||
Corresponding_transcript | K09B11.10.1 | ||||||||
Other_sequence | Dviv_isotig17459 | ||||||||
CSC01830_1 | |||||||||
FD514174.1 | |||||||||
JI169078.1 | |||||||||
Associated_feature | WBsf652343 | ||||||||
WBsf998405 | |||||||||
WBsf231132 | |||||||||
Experimental_info | RNAi_result | WBRNAi00034180 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00016869 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00050371 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1014564 | ||||||||
Expr1034689 | |||||||||
Expr1154077 | |||||||||
Expr2013363 | |||||||||
Expr2031595 | |||||||||
Microarray_results (17) | |||||||||
Expression_cluster (194) | |||||||||
Interaction | WBInteraction000272119 | ||||||||
WBInteraction000326679 | |||||||||
WBInteraction000350924 | |||||||||
WBInteraction000351841 | |||||||||
WBInteraction000374449 | |||||||||
WBInteraction000560983 | |||||||||
Map_info | Map | IV | Position | 9.25487 | |||||
Positive | Positive_clone | K09B11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |