WormBase Tree Display for Gene: WBGene00010716

WBGene00010716 SMap: S_parent: Sequence: K09C8
  Identity: Version: 2
    Name: CGC_name: lge-1 Person_evidence: WBPerson345
      Sequence_name: K09C8.4
      Molecular_name: K09C8.4
        K09C8.4.1
        CE44089
      Other_name: CELE_K09C8.4 Accession_evidence: NDB BX284606
      Public_name: lge-1
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 15 Nov 2004 13:50:18 WBPerson2970 Name_change: CGC_name: lge-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lge
    Allele (50)
    RNASeq_FPKM (74)
    GO_annotation: 00071496
      00071497
      00071498
      00071499
      00071500
      00071501
      00071502
      00071503
      00071504
      00118069
    Ortholog (47)
    Paralog: WBGene00008290 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00008491 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00010167 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00010694 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00017723 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00011779 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00015982 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00009032 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable glucuronosyltransferase activity and xylosyltransferase activity. Predicted to be involved in protein O-linked mannosylation. Predicted to be located in Golgi apparatus. Human ortholog(s) of this gene implicated in congenital muscular dystrophy-dystroglycanopathy type A6 and muscular dystrophy-dystroglycanopathy type B6. Is an ortholog of human LARGE2 (LARGE xylosyl- and glucuronyltransferase 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0111242 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:6511)
      DOID:0110637 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:6511)
  Molecular_info: Corresponding_CDS: K09C8.4
    Corresponding_CDS_history: K09C8.4:wp122
      K09C8.4:wp196
      K09C8.4:wp206
    Corresponding_transcript: K09C8.4.1
    Other_sequence: JI474807.1
      JI469136.1
    Associated_feature: WBsf1006870
      WBsf236323
  Experimental_info: RNAi_result: WBRNAi00016894 Inferred_automatically: RNAi_primary
      WBRNAi00034198 Inferred_automatically: RNAi_primary
      WBRNAi00092980 Inferred_automatically: RNAi_primary
      WBRNAi00050403 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012020
      Expr1154106
      Expr2013141
      Expr2031373
    Drives_construct: WBCnstr00031199
    Construct_product: WBCnstr00031199
    Microarray_results (19)
    Expression_cluster (107)
  Map_info: Map: X Position: 2.77227 Error: 0.007934
    Positive: Positive_clone: K09C8 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4566
        4899
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene