WormBase Tree Display for Gene: WBGene00010811
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| WBGene00010811 | SMap | S_parent | Sequence | M01F1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | hmit-1.3 | Person_evidence | WBPerson353 | |||||
| Sequence_name | M01F1.5 | ||||||||
| Molecular_name | M01F1.5 | ||||||||
| M01F1.5.1 | |||||||||
| CE33672 | |||||||||
| M01F1.5.2 | |||||||||
| Other_name | CELE_M01F1.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | hmit-1.3 | ||||||||
| DB_info | Database | AceView | gene | 3E602 | |||||
| WormQTL | gene | WBGene00010811 | |||||||
| WormFlux | gene | WBGene00010811 | |||||||
| NDB | locus_tag | CELE_M01F1.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010811|UniProtKB=Q21455 | |||||||
| family | PTHR48020 | ||||||||
| NCBI | gene | 175458 | |||||||
| RefSeq | protein | NM_065324.7 | |||||||
| SwissProt | UniProtAcc | Q21455 | |||||||
| TREEFAM | TREEFAM_ID | TF314916 | |||||||
| UniProt_GCRP | UniProtAcc | Q21455 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 16 Feb 2007 14:39:36 | WBPerson2970 | Name_change | CGC_name | hmit-1.3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hmit | ||||||||
| Allele (150) | |||||||||
| Strain | WBStrain00001545 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (31) | |||||||||
| Paralog (25) | |||||||||
| Structured_description | Concise_description | hmit-1.3 encodes one of three C. elegans proton (H+)-dependent myo-inositol transporters; loss of hmit-1.3 activity via large-scale RNAi result in no obvious abnormalities but by homology, HMIT-1.3 is predicted to function as a plasma membrane protein required for the regulated uptake of myo-inositol and thus potentially for regulation of cell signaling and intracellular osmolarity. | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 25 Apr 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable myo-inositol:proton symporter activity. Predicted to be involved in myo-inositol transport and transmembrane transport. Located in apical plasma membrane. Expressed in amphid sheath cell; head; and phasmid sheath cell. Is an ortholog of human SLC2A13 (solute carrier family 2 member 13). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M01F1.5 | |||||||
| Corresponding_CDS_history | M01F1.5:wp98 | ||||||||
| Corresponding_transcript | M01F1.5.1 | ||||||||
| M01F1.5.2 | |||||||||
| Other_sequence (66) | |||||||||
| Associated_feature | WBsf650911 | ||||||||
| WBsf666424 | |||||||||
| WBsf666650 | |||||||||
| WBsf716728 | |||||||||
| WBsf991795 | |||||||||
| WBsf1014577 | |||||||||
| WBsf226358 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00006197 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034362 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00050771 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017104 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram559 | ||||||||
| Expr6405 | |||||||||
| Expr9310 | |||||||||
| Expr9313 | |||||||||
| Expr1012926 | |||||||||
| Expr1034738 | |||||||||
| Expr1154466 | |||||||||
| Expr2012528 | |||||||||
| Expr2030767 | |||||||||
| Drives_construct | WBCnstr00002387 | ||||||||
| WBCnstr00008841 | |||||||||
| WBCnstr00013891 | |||||||||
| WBCnstr00013894 | |||||||||
| Construct_product | WBCnstr00013894 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (167) | |||||||||
| Interaction (58) | |||||||||
| Map_info | Map | III | Position | -6.13586 | Error | 0.06541 | |||
| Positive | Positive_clone | M01F1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00038529 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065331 | |||||||||
| WBPaper00065341 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
