WormBase Tree Display for Gene: WBGene00010872
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| WBGene00010872 | SMap | S_parent | Sequence | M05B5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | plag-15 | Person_evidence | WBPerson3997 | |||||
| Sequence_name | M05B5.4 | ||||||||
| Molecular_name | M05B5.4 | ||||||||
| M05B5.4.1 | |||||||||
| CE06190 | |||||||||
| Other_name | lpla-2 | Paper_evidence | WBPaper00061595 | ||||||
| Curator_confirmed | WBPerson21950 | ||||||||
| CELE_M05B5.4 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | plag-15 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Dec 2021 11:50:30 | WBPerson1983 | Name_change | CGC_name | plag-15 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | plag | ||||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00071987 | ||||||||
| 00118196 | |||||||||
| 00118197 | |||||||||
| Ortholog (44) | |||||||||
| Structured_description | Concise_description | The M05B5.4 gene encodes an ortholog of the human gene LECITHIN-CHOLESTEROL ACYLTRANSFERASE (LCAT; OMIM:606967), which when mutated leads to lecithin-cholesterol acyltransferase deficiency (OMIM:245900). | Paper_evidence | WBPaper00004637 | |||||
| Curator_confirmed | WBPerson1823 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable O-acyltransferase activity. Predicted to be involved in lipid metabolic process. Expressed in hypodermis; intestine; neuronal sheath cell; pharynx; and tail. Human ortholog(s) of this gene implicated in Norum disease and arteriosclerosis. Is an ortholog of human PLA2G15 (phospholipase A2 group XV). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:1391 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6522) | ||||
| DOID:2349 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6522) | ||||||
| Molecular_info | Corresponding_CDS | M05B5.4 | |||||||
| Corresponding_transcript | M05B5.4.1 | ||||||||
| Other_sequence (31) | |||||||||
| Associated_feature | WBsf643430 | ||||||||
| WBsf643431 | |||||||||
| WBsf656488 | |||||||||
| WBsf984119 | |||||||||
| WBsf1010046 | |||||||||
| WBsf217962 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00023279 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00114805 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004041 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024077 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023790 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023542 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116533 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00050928 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4067 | ||||||||
| Expr15998 | |||||||||
| Expr15999 | |||||||||
| Expr1013497 | |||||||||
| Expr1034765 | |||||||||
| Expr1154624 | |||||||||
| Expr2005215 | |||||||||
| Expr2023433 | |||||||||
| Drives_construct | WBCnstr00031093 | ||||||||
| WBCnstr00042658 | |||||||||
| Construct_product | WBCnstr00031093 | ||||||||
| WBCnstr00042658 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (147) | |||||||||
| Interaction (18) | |||||||||
| Map_info | Map | I | Position | 1.83191 | |||||
| Positive | Positive_clone | M05B5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00029387 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042257 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059755 | |||||||||
| WBPaper00061595 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
