WormBase Tree Display for Gene: WBGene00010906
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| WBGene00010906 | SMap | S_parent | Sequence | M88 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | M88.3 | |||||||
| Molecular_name | M88.3 | ||||||||
| M88.3.1 | |||||||||
| CE01038 | |||||||||
| Other_name | CELE_M88.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | M88.3 | ||||||||
| DB_info | Database | AceView | gene | 3F632 | |||||
| WormQTL | gene | WBGene00010906 | |||||||
| WormFlux | gene | WBGene00010906 | |||||||
| NDB | locus_tag | CELE_M88.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010906|UniProtKB=Q21600 | |||||||
| family | PTHR31430 | ||||||||
| NCBI | gene | 187471 | |||||||
| RefSeq | protein | NM_065520.2 | |||||||
| TREEFAM | TREEFAM_ID | TF317842 | |||||||
| TrEMBL | UniProtAcc | Q21600 | |||||||
| UniProt_GCRP | UniProtAcc | Q21600 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (23) | |||||||||
| Strain | WBStrain00002149 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00007209 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00009502 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00014641 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| WBGene00017833 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016040 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011129 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020400 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00044979 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012120 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00011297 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in several structures, including I5 neuron; ciliated neurons; germ line; interfacial epithelial cell; and rect_D based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and pgl-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including methylmercuric chloride; allantoin; and Sirolimus based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M88.3 | |||||||
| Corresponding_transcript | M88.3.1 | ||||||||
| Other_sequence | CJC11760_1 | ||||||||
| Associated_feature | WBsf226544 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00005254 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00103466 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017281 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094774 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034499 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051072 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram316 | ||||||||
| Expr6437 | |||||||||
| Expr1022455 | |||||||||
| Expr1034786 | |||||||||
| Expr1154774 | |||||||||
| Expr2005293 | |||||||||
| Expr2023513 | |||||||||
| Drives_construct | WBCnstr00002908 | ||||||||
| WBCnstr00031063 | |||||||||
| Construct_product | WBCnstr00031063 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (121) | |||||||||
| Interaction | WBInteraction000503226 | ||||||||
| Map_info | Positive | Positive_clone | M88 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -3.11801 | |||||||
| Reference | WBPaper00027315 | ||||||||
| WBPaper00064325 | |||||||||
| Method | Gene |
